Analysis of interatomic Contacts of Structural Units in PDB entry:
6MTI

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6MTI entry

There are 30 chains in PDB entry 6MTI (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
1	LYS 141	LYS 267
2	LYS 141	LYS 701
3	LYS 141	LYS 701
4	LYS 141	LYS 701
5	LYS 141	LYS 701
6	LYS 141	LYS 267
A	SER 28	TRP 89
B	MET 190	LYS 256
C	GLU 10	GLY 82
D	MET 140	LEU 203
E	SER 28	TRP 89
F	MET 190	LYS 256
G	GLU 10	GLY 82
H	MET 140	LEU 203
I	SER 28	TRP 89
J	MET 190	LYS 256
K	GLU 10	GLY 82
L	MET 140	LEU 203
M	SER 28	TRP 89
N	MET 190	LYS 256
O	GLU 10	GLY 82
P	MET 140	LEU 203
Q	SER 28	TRP 89
R	MET 190	LYS 256
S	GLU 10	GLY 82
T	MET 140	LEU 203
U	SER 28	TRP 89
V	MET 190	LYS 256
W	GLU 10	GLY 82
X	MET 140	LEU 203

There are 42 helices in PDB entry 6MTI. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	1	215	220	Right-handed alpha
Helix 2	AA2	2	215	220	Right-handed alpha
Helix 3	AA3	2	632	635	Right-handed 310
Helix 4	AA4	2	665	677	Right-handed alpha
Helix 5	AA5	2	690	699	Right-handed alpha
Helix 6	AA6	3	215	220	Right-handed alpha
Helix 7	AA7	3	632	635	Right-handed 310
Helix 8	AA8	3	665	677	Right-handed alpha
Helix 9	AA9	3	690	699	Right-handed alpha
Helix 10	AB1	4	215	220	Right-handed alpha
Helix 11	AB2	4	632	635	Right-handed 310
Helix 12	AB3	4	665	677	Right-handed alpha
Helix 13	AB4	4	690	699	Right-handed alpha
Helix 14	AB5	5	215	220	Right-handed alpha
Helix 15	AB6	5	632	635	Right-handed 310
Helix 16	AB7	5	665	677	Right-handed alpha
Helix 17	AB8	5	690	699	Right-handed alpha
Helix 18	AB9	6	215	220	Right-handed alpha
Helix 19	AC1	A	29	89	Right-handed alpha
Helix 20	AC2	B	191	256	Right-handed alpha
Helix 21	AC3	C	11	82	Right-handed alpha
Helix 22	AC4	D	141	202	Right-handed alpha
Helix 23	AC5	E	29	89	Right-handed alpha
Helix 24	AC6	F	191	256	Right-handed alpha
Helix 25	AC7	G	11	82	Right-handed alpha
Helix 26	AC8	H	141	202	Right-handed alpha
Helix 27	AC9	I	29	89	Right-handed alpha
Helix 28	AD1	J	191	256	Right-handed alpha
Helix 29	AD2	K	11	82	Right-handed alpha
Helix 30	AD3	L	141	202	Right-handed alpha
Helix 31	AD4	M	29	89	Right-handed alpha
Helix 32	AD5	N	191	256	Right-handed alpha
Helix 33	AD6	O	11	82	Right-handed alpha
Helix 34	AD7	P	141	202	Right-handed alpha
Helix 35	AD8	Q	29	89	Right-handed alpha
Helix 36	AD9	R	191	256	Right-handed alpha
Helix 37	AE1	S	11	82	Right-handed alpha
Helix 38	AE2	T	141	202	Right-handed alpha
Helix 39	AE3	U	29	89	Right-handed alpha
Helix 40	AE4	V	191	256	Right-handed alpha
Helix 41	AE5	W	11	82	Right-handed alpha
Helix 42	AE6	X	141	202	Right-handed alpha

There are 20 sheets in PDB entry 6MTI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	1	205	212	first strand
Strand 2	1	157	166	anti-parallel
Strand 3	1	144	152	anti-parallel
Strand 4	1	256	261	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	1	193	194	first strand
Strand 2	1	179	185	anti-parallel
Strand 3	1	223	230	anti-parallel
Strand 4	1	239	246	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	205	212	first strand
Strand 2	2	157	166	anti-parallel
Strand 3	2	144	152	anti-parallel
Strand 4	2	256	261	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	193	194	first strand
Strand 2	2	179	185	anti-parallel
Strand 3	2	223	230	anti-parallel
Strand 4	2	239	246	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	619	627	first strand
Strand 2	2	569	578	anti-parallel
Strand 3	2	556	564	anti-parallel
Strand 4	2	682	687	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	2	602	608	first strand
Strand 2	2	591	599	anti-parallel
Strand 3	2	637	644	anti-parallel
Strand 4	2	653	660	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	205	212	first strand
Strand 2	3	157	166	anti-parallel
Strand 3	3	144	152	anti-parallel
Strand 4	3	256	261	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	193	194	first strand
Strand 2	3	179	185	anti-parallel
Strand 3	3	223	230	anti-parallel
Strand 4	3	239	246	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	619	627	first strand
Strand 2	3	569	578	anti-parallel
Strand 3	3	556	564	anti-parallel
Strand 4	3	682	687	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	3	602	608	first strand
Strand 2	3	591	599	anti-parallel
Strand 3	3	637	644	anti-parallel
Strand 4	3	653	660	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	205	212	first strand
Strand 2	4	157	166	anti-parallel
Strand 3	4	144	152	anti-parallel
Strand 4	4	256	261	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	193	194	first strand
Strand 2	4	179	185	anti-parallel
Strand 3	4	223	230	anti-parallel
Strand 4	4	239	246	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	619	627	first strand
Strand 2	4	569	578	anti-parallel
Strand 3	4	556	564	anti-parallel
Strand 4	4	682	687	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	4	602	608	first strand
Strand 2	4	591	599	anti-parallel
Strand 3	4	637	644	anti-parallel
Strand 4	4	653	660	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	205	212	first strand
Strand 2	5	157	166	anti-parallel
Strand 3	5	144	152	anti-parallel
Strand 4	5	256	261	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	193	194	first strand
Strand 2	5	179	185	anti-parallel
Strand 3	5	223	230	anti-parallel
Strand 4	5	239	246	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	619	627	first strand
Strand 2	5	569	578	anti-parallel
Strand 3	5	556	564	anti-parallel
Strand 4	5	682	687	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	602	608	first strand
Strand 2	5	591	599	anti-parallel
Strand 3	5	637	644	anti-parallel
Strand 4	5	653	660	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	205	212	first strand
Strand 2	6	157	166	anti-parallel
Strand 3	6	144	152	anti-parallel
Strand 4	6	256	261	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	193	194	first strand
Strand 2	6	179	185	anti-parallel
Strand 3	6	223	230	anti-parallel
Strand 4	6	239	246	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6MTI

Analysis of interatomic Contacts of Structural Units in PDB entry:
6MTI