Analysis of interatomic Contacts of Structural Units in PDB entry:
6MUJ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6MUJ entry

There are 5 chains in PDB entry 6MUJ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 18	ASP 306
B	GLU 13	ASP 306
C	ALA 18	ASP 306
D	ALA 17	SER 309
E	PRO 20	GLY 310

There are 44 helices in PDB entry 6MUJ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	44	48	Right-handed 310
Helix 2	AA2	A	68	80	Right-handed alpha
Helix 3	AA3	A	83	89	Right-handed alpha
Helix 4	AA4	A	96	98	Right-handed 310
Helix 5	AA5	A	101	103	Right-handed 310
Helix 6	AA6	A	145	157	Right-handed alpha
Helix 7	AA7	A	162	172	Right-handed alpha
Helix 8	AA8	A	186	190	Right-handed 310
Helix 9	AA9	A	245	249	Right-handed 310
Helix 10	AB1	B	44	48	Right-handed 310
Helix 11	AB2	B	68	80	Right-handed alpha
Helix 12	AB3	B	83	89	Right-handed alpha
Helix 13	AB4	B	96	98	Right-handed 310
Helix 14	AB5	B	101	103	Right-handed 310
Helix 15	AB6	B	145	157	Right-handed alpha
Helix 16	AB7	B	162	172	Right-handed alpha
Helix 17	AB8	B	186	190	Right-handed 310
Helix 18	AB9	C	44	48	Right-handed 310
Helix 19	AC1	C	68	80	Right-handed alpha
Helix 20	AC2	C	83	89	Right-handed alpha
Helix 21	AC3	C	96	98	Right-handed 310
Helix 22	AC4	C	101	103	Right-handed 310
Helix 23	AC5	C	145	156	Right-handed alpha
Helix 24	AC6	C	162	172	Right-handed alpha
Helix 25	AC7	C	186	190	Right-handed 310
Helix 26	AC8	C	245	249	Right-handed 310
Helix 27	AC9	D	44	48	Right-handed 310
Helix 28	AD1	D	68	80	Right-handed alpha
Helix 29	AD2	D	83	89	Right-handed alpha
Helix 30	AD3	D	96	98	Right-handed 310
Helix 31	AD4	D	101	103	Right-handed 310
Helix 32	AD5	D	145	157	Right-handed alpha
Helix 33	AD6	D	162	172	Right-handed alpha
Helix 34	AD7	D	186	190	Right-handed 310
Helix 35	AD8	D	244	249	Right-handed alpha
Helix 36	AD9	E	44	48	Right-handed 310
Helix 37	AE1	E	68	80	Right-handed alpha
Helix 38	AE2	E	83	89	Right-handed alpha
Helix 39	AE3	E	96	98	Right-handed 310
Helix 40	AE4	E	101	103	Right-handed 310
Helix 41	AE5	E	145	156	Right-handed alpha
Helix 42	AE6	E	162	172	Right-handed alpha
Helix 43	AE7	E	186	190	Right-handed 310
Helix 44	AE8	E	244	249	Right-handed alpha

There are 22 sheets in PDB entry 6MUJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	26	29	first strand
Strand 2	A	60	63	anti-parallel
Strand 3	A	302	304	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	32	36	first strand
Strand 2	A	53	57	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	90	94	first strand
Strand 2	A	115	119	anti-parallel
Strand 3	A	105	108	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	286	288	first strand
Strand 2	A	263	266	anti-parallel
Strand 3	A	234	240	anti-parallel
Strand 4	A	297	298	parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	26	29	first strand
Strand 2	B	60	63	anti-parallel
Strand 3	B	302	304	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	32	36	first strand
Strand 2	B	53	57	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	90	94	first strand
Strand 2	B	115	119	anti-parallel
Strand 3	B	105	108	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	286	288	first strand
Strand 2	B	263	266	anti-parallel
Strand 3	B	234	240	anti-parallel
Strand 4	B	297	299	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	26	29	first strand
Strand 2	C	60	63	anti-parallel
Strand 3	C	302	304	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	32	36	first strand
Strand 2	C	53	57	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	90	94	first strand
Strand 2	C	112	119	anti-parallel
Strand 3	C	105	109	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	198	199	first strand
Strand 2	C	203	204	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	286	288	first strand
Strand 2	C	263	266	anti-parallel
Strand 3	C	234	240	anti-parallel
Strand 4	C	297	298	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	26	29	first strand
Strand 2	D	60	63	anti-parallel
Strand 3	D	302	304	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	32	36	first strand
Strand 2	D	53	57	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	90	94	first strand
Strand 2	D	115	119	anti-parallel
Strand 3	D	105	108	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	198	199	first strand
Strand 2	D	203	204	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	286	288	first strand
Strand 2	D	263	266	anti-parallel
Strand 3	D	234	240	anti-parallel
Strand 4	D	297	298	parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	26	29	first strand
Strand 2	E	60	63	anti-parallel
Strand 3	E	302	304	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	32	36	first strand
Strand 2	E	53	57	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	90	94	first strand
Strand 2	E	115	119	anti-parallel
Strand 3	E	105	108	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	286	288	first strand
Strand 2	E	263	266	anti-parallel
Strand 3	E	234	240	anti-parallel
Strand 4	E	297	298	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6MUJ

Analysis of interatomic Contacts of Structural Units in PDB entry:
6MUJ