Analysis of interatomic Contacts of Structural Units in PDB entry:
6MUR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MUR entry

There are 8 chains in PDB entry 6MUR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLU 2ARG 777
B
VAL 23GLY 185
C
ARG 4LEU 287
D
MET 1LEU 287
E
PRO 2GLY 287
G
G 1 C 27
H
G 17 C 35
F
MET 1GLU 397
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 77 helices in PDB entry 6MUR. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
2 12Right-handed alpha
Helix 2
AA2
A
17 22Right-handed alpha
Helix 3
AA3
A
29 44Right-handed alpha
Helix 4
AA4
A
48 53Right-handed alpha
Helix 5
AA5
A
69 78Right-handed alpha
Helix 6
AA6
A
79 83Right-handed 310
Helix 7
AA7
A
88 106Right-handed alpha
Helix 8
AA8
A
150 168Right-handed alpha
Helix 9
AA9
A
175 183Right-handed alpha
Helix 10
AB1
A
197 216Right-handed alpha
Helix 11
AB2
A
218 224Right-handed alpha
Helix 12
AB3
A
243 248Right-handed alpha
Helix 13
AB4
A
258 282Right-handed alpha
Helix 14
AB5
A
284 286Right-handed 310
Helix 15
AB6
A
303 325Right-handed alpha
Helix 16
AB7
A
351 368Right-handed alpha
Helix 17
AB8
A
413 424Right-handed alpha
Helix 18
AB9
A
524 530Right-handed alpha
Helix 19
AC1
A
534 549Right-handed alpha
Helix 20
AC2
A
553 558Right-handed alpha
Helix 21
AC3
A
561 566Right-handed alpha
Helix 22
AC4
A
596 614Right-handed alpha
Helix 23
AC5
A
632 649Right-handed alpha
Helix 24
AC6
A
674 688Right-handed alpha
Helix 25
AC7
A
702 719Right-handed alpha
Helix 26
AC8
A
723 736Right-handed alpha
Helix 27
AC9
A
749 756Right-handed alpha
Helix 28
AD1
A
764 775Right-handed alpha
Helix 29
AD2
B
24 28Right-handed alpha
Helix 30
AD3
B
34 42Right-handed alpha
Helix 31
AD4
B
46 63Right-handed alpha
Helix 32
AD5
B
72 88Right-handed alpha
Helix 33
AD6
B
91 110Right-handed alpha
Helix 34
AD7
B
116 132Right-handed alpha
Helix 35
AD8
B
139 156Right-handed alpha
Helix 36
AD9
B
165 182Right-handed alpha
Helix 37
AE1
C
51 70Right-handed alpha
Helix 38
AE2
C
71 75Right-handed 310
Helix 39
AE3
C
115 120Right-handed alpha
Helix 40
AE4
C
122 129Right-handed alpha
Helix 41
AE5
C
149 158Right-handed alpha
Helix 42
AE6
C
206 221Right-handed alpha
Helix 43
AE7
C
247 254Right-handed alpha
Helix 44
AE8
C
275 280Right-handed alpha
Helix 45
AE9
C
282 287Right-handed alpha
Helix 46
AF1
D
51 70Right-handed alpha
Helix 47
AF2
D
115 120Right-handed alpha
Helix 48
AF3
D
149 158Right-handed alpha
Helix 49
AF4
D
206 221Right-handed alpha
Helix 50
AF5
D
228 232Right-handed 310
Helix 51
AF6
D
247 254Right-handed alpha
Helix 52
AF7
D
267 272Right-handed alpha
Helix 53
AF8
D
275 280Right-handed alpha
Helix 54
AF9
D
280 285Right-handed alpha
Helix 55
AG1
E
21 36Right-handed alpha
Helix 56
AG2
E
37 51Right-handed alpha
Helix 57
AG3
E
85 99Right-handed alpha
Helix 58
AG4
E
103 111Right-handed alpha
Helix 59
AG5
E
164 169Right-handed alpha
Helix 60
AG6
E
171 179Right-handed alpha
Helix 61
AG7
E
187 191Right-handed 310
Helix 62
AG8
F
36 44Right-handed alpha
Helix 63
AG9
F
51 60Right-handed alpha
Helix 64
AH1
F
66 71Right-handed alpha
Helix 65
AH2
F
113 133Right-handed alpha
Helix 66
AH3
F
137 142Right-handed alpha
Helix 67
AH4
F
148 156Right-handed alpha
Helix 68
AH5
F
160 168Right-handed alpha
Helix 69
AH6
F
179 187Right-handed alpha
Helix 70
AH7
F
204 207Right-handed 310
Helix 71
AH8
F
218 220Right-handed 310
Helix 72
AH9
F
257 262Right-handed alpha
Helix 73
AI1
F
271 276Right-handed alpha
Helix 74
AI2
F
284 304Right-handed alpha
Helix 75
AI3
F
317 326Right-handed alpha
Helix 76
AI4
F
345 349Right-handed 310
Helix 77
AI5
F
354 365Right-handed alpha
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There are 31 sheets in PDB entry 6MUR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
288 291first strand
Strand 2
A
295 301anti-parallel
Strand 3
A
233 241anti-parallel
Strand 4
A
330 338anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
345 346first strand
Strand 2
A
349 350anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
386 389first strand
Strand 2
A
394 397anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
402 403first strand
Strand 2
A
411 412anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
444 445first strand
Strand 2
A
450 453anti-parallel
Strand 3
A
432 435anti-parallel
Strand 4
A
464 468anti-parallel
Strand 5
A
481 485parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
580 585first strand
Strand 2
A
590 595anti-parallel
Strand 3
A
515 520anti-parallel
Strand 4
A
622 627anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
654 655first strand
Strand 2
A
672 673anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
689 691first strand
Strand 2
A
694 695anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
49 50first strand
Strand 2
C
146 148anti-parallel
Strand 3
C
191 200anti-parallel
Strand 4
C
141 143anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
49 50first strand
Strand 2
C
146 148anti-parallel
Strand 3
C
191 200anti-parallel
Strand 4
C
7 17anti-parallel
Strand 5
C
236 244anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
85 88first strand
Strand 2
C
99 101parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
103 104first strand
Strand 2
C
109 110anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
163 168first strand
Strand 2
C
181 186anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
49 50first strand
Strand 2
D
146 148anti-parallel
Strand 3
D
191 200anti-parallel
Strand 4
D
141 143anti-parallel
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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
49 50first strand
Strand 2
D
146 148anti-parallel
Strand 3
D
191 200anti-parallel
Strand 4
D
7 17anti-parallel
Strand 5
D
236 244anti-parallel
Strand 6
D
261 262anti-parallel
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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
85 88first strand
Strand 2
D
99 101parallel
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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
103 104first strand
Strand 2
D
109 110anti-parallel
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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
163 171first strand
Strand 2
D
178 186anti-parallel
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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
58 61first strand
Strand 2
E
155 161anti-parallel
Strand 3
E
3 11anti-parallel
Strand 4
E
195 199anti-parallel
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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
58 61first strand
Strand 2
E
155 161anti-parallel
Strand 3
E
3 11anti-parallel
Strand 4
E
202 203anti-parallel
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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
67 68first strand
Strand 2
E
101 102anti-parallel
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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
124 125first strand
Strand 2
E
150 151anti-parallel
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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
128 132first strand
Strand 2
E
143 147anti-parallel
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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
252 253first strand
Strand 2
E
211 214anti-parallel
Strand 3
E
279 282anti-parallel
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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
229 232first strand
Strand 2
E
244 247anti-parallel
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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
235 236first strand
Strand 2
E
239 240anti-parallel
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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
261 263first strand
Strand 2
E
271 273anti-parallel
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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
250 251first strand
Strand 2
F
4 8anti-parallel
Strand 3
F
393 396anti-parallel
Strand 4
F
331 334anti-parallel
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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
15 20first strand
Strand 2
F
100 103anti-parallel
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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
209 211first strand
Strand 2
F
253 255anti-parallel
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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
236 243first strand
Strand 2
F
222 230anti-parallel
Strand 3
F
383 386anti-parallel
Strand 4
F
389 390anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il