Analysis of interatomic Contacts of Structural Units in PDB entry:
6MVJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MVJ entry

There is 1 chain in PDB entry 6MVJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 22PRO 234
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 6MVJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
37 41Right-handed 310
Helix 2
AA2
A
68 72Right-handed 310
Helix 3
AA3
A
103 108Right-handed alpha
Helix 4
AA4
A
155 162Right-handed alpha
Helix 5
AA5
A
174 181Right-handed 310
Helix 6
AA6
A
182 184Right-handed 310
Helix 7
AA7
A
185 194Right-handed alpha
Helix 8
AA8
A
212 220Right-handed alpha
Helix 9
AA9
A
225 229Right-handed 310
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There are 2 sheets in PDB entry 6MVJ. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 87first strand
Strand 2
A
90 99anti-parallel
Strand 3
A
140 145anti-parallel
Strand 4
A
23 31parallel
Strand 5
A
203 209anti-parallel
Strand 6
A
111 116anti-parallel
Strand 7
A
125 133anti-parallel
Strand 8
A
90 99parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 54first strand
Strand 2
A
60 61anti-parallel
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