Analysis of interatomic Contacts of Structural Units in PDB entry:
6MVS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MVS entry

There is 1 chain in PDB entry 6MVS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 15GLY 765
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 6MVS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 30Right-handed alpha
Helix 2
AA2
A
65 86Right-handed alpha
Helix 3
AA3
A
86 104Right-handed alpha
Helix 4
AA4
A
104 117Right-handed alpha
Helix 5
AA5
A
119 126Right-handed alpha
Helix 6
AA6
A
126 149Right-handed alpha
Helix 7
AA7
A
166 181Right-handed alpha
Helix 8
AA8
A
194 204Right-handed alpha
Helix 9
AA9
A
220 229Right-handed alpha
Helix 10
AB1
A
240 252Right-handed alpha
Helix 11
AB2
A
275 285Right-handed alpha
Helix 12
AB3
A
307 321Right-handed alpha
Helix 13
AB4
A
339 353Right-handed alpha
Helix 14
AB5
A
381 385Right-handed 310
Helix 15
AB6
A
400 409Right-handed alpha
Helix 16
AB7
A
423 431Right-handed alpha
Helix 17
AB8
A
432 434Right-handed 310
Helix 18
AB9
A
456 458Right-handed 310
Helix 19
AC1
A
466 472Right-handed 310
Helix 20
AC2
A
536 550Right-handed alpha
Helix 21
AC3
A
551 556Right-handed 310
Helix 22
AC4
A
557 575Right-handed alpha
Helix 23
AC5
A
575 588Right-handed alpha
Helix 24
AC6
A
591 609Right-handed alpha
Helix 25
AC7
A
645 658Right-handed alpha
Helix 26
AC8
A
671 684Right-handed alpha
Helix 27
AC9
A
697 708Right-handed alpha
Helix 28
AD1
A
720 728Right-handed alpha
Helix 29
AD2
A
746 754Right-handed alpha
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There are 8 sheets in PDB entry 6MVS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 36first strand
Strand 2
A
39 40anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 50first strand
Strand 2
A
57 62anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
152 154first strand
Strand 2
A
474 476anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 216first strand
Strand 2
A
184 188parallel
Strand 3
A
157 161parallel
Strand 4
A
234 238parallel
Strand 5
A
257 261parallel
Strand 6
A
460 461anti-parallel
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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
357 360first strand
Strand 2
A
372 375anti-parallel
Strand 3
A
392 398parallel
Strand 4
A
297 304parallel
Strand 5
A
266 270parallel
Strand 6
A
416 420parallel
Strand 7
A
438 441parallel
Strand 8
A
755 762parallel
Strand 9
A
624 631anti-parallel
Strand 10
A
615 618anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
504 506first strand
Strand 2
A
509 511anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
518 522first strand
Strand 2
A
528 533anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
691 694first strand
Strand 2
A
661 665parallel
Strand 3
A
634 638parallel
Strand 4
A
713 716parallel
Strand 5
A
734 736parallel
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