Analysis of interatomic Contacts of Structural Units in PDB entry:
6MW3

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6MW3 entry

There are 4 chains in PDB entry 6MW3 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	ASN 4	THR 687
D	ASN 4	THR 687
I	UNK 309	UNK 316
J	UNK 309	UNK 316

There are 60 helices in PDB entry 6MW3. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	7	14	Right-handed alpha
Helix 2	AA2	C	15	18	Right-handed 310
Helix 3	AA3	C	26	40	Right-handed alpha
Helix 4	AA4	C	50	60	Right-handed alpha
Helix 5	AA5	C	67	71	Right-handed 310
Helix 6	AA6	C	73	86	Right-handed alpha
Helix 7	AA7	C	94	99	Right-handed alpha
Helix 8	AA8	C	117	131	Right-handed alpha
Helix 9	AA9	C	133	145	Right-handed alpha
Helix 10	AB1	C	152	158	Right-handed alpha
Helix 11	AB2	C	178	194	Right-handed alpha
Helix 12	AB3	C	222	235	Right-handed alpha
Helix 13	AB4	C	257	263	Right-handed alpha
Helix 14	AB5	C	285	295	Right-handed alpha
Helix 15	AB6	C	302	311	Right-handed alpha
Helix 16	AB7	C	313	317	Right-handed 310
Helix 17	AB8	C	318	329	Right-handed alpha
Helix 18	AB9	C	338	353	Right-handed alpha
Helix 19	AC1	C	361	366	Right-handed alpha
Helix 20	AC2	C	416	423	Right-handed alpha
Helix 21	AC3	C	424	443	Right-handed alpha
Helix 22	AC4	C	448	458	Right-handed alpha
Helix 23	AC5	C	468	475	Right-handed alpha
Helix 24	AC6	C	481	511	Right-handed alpha
Helix 25	AC7	C	527	531	Right-handed 310
Helix 26	AC8	C	540	547	Right-handed alpha
Helix 27	AC9	C	554	568	Right-handed alpha
Helix 28	AD1	C	620	624	Right-handed 310
Helix 29	AD2	C	633	646	Right-handed alpha
Helix 30	AD3	C	663	678	Right-handed alpha
Helix 31	AD4	D	7	14	Right-handed alpha
Helix 32	AD5	D	15	18	Right-handed 310
Helix 33	AD6	D	26	40	Right-handed alpha
Helix 34	AD7	D	50	60	Right-handed alpha
Helix 35	AD8	D	67	71	Right-handed 310
Helix 36	AD9	D	73	86	Right-handed alpha
Helix 37	AE1	D	94	99	Right-handed alpha
Helix 38	AE2	D	117	131	Right-handed alpha
Helix 39	AE3	D	133	145	Right-handed alpha
Helix 40	AE4	D	152	158	Right-handed alpha
Helix 41	AE5	D	178	194	Right-handed alpha
Helix 42	AE6	D	222	235	Right-handed alpha
Helix 43	AE7	D	257	263	Right-handed alpha
Helix 44	AE8	D	285	295	Right-handed alpha
Helix 45	AE9	D	302	311	Right-handed alpha
Helix 46	AF1	D	313	317	Right-handed 310
Helix 47	AF2	D	318	329	Right-handed alpha
Helix 48	AF3	D	338	353	Right-handed alpha
Helix 49	AF4	D	361	366	Right-handed alpha
Helix 50	AF5	D	416	423	Right-handed alpha
Helix 51	AF6	D	424	443	Right-handed alpha
Helix 52	AF7	D	448	458	Right-handed alpha
Helix 53	AF8	D	468	475	Right-handed alpha
Helix 54	AF9	D	481	511	Right-handed alpha
Helix 55	AG1	D	527	531	Right-handed 310
Helix 56	AG2	D	540	547	Right-handed alpha
Helix 57	AG3	D	554	568	Right-handed alpha
Helix 58	AG4	D	620	624	Right-handed 310
Helix 59	AG5	D	633	646	Right-handed alpha
Helix 60	AG6	D	663	678	Right-handed alpha

There are 8 sheets in PDB entry 6MW3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	150	151	first strand
Strand 2	C	412	413	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	357	360	first strand
Strand 2	C	281	284	parallel
Strand 3	C	248	252	parallel
Strand 4	C	199	202	parallel
Strand 5	C	171	172	parallel
Strand 6	C	407	408	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	298	301	first strand
Strand 2	C	334	337	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	601	604	first strand
Strand 2	C	611	614	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	150	151	first strand
Strand 2	D	412	413	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	357	360	first strand
Strand 2	D	281	284	parallel
Strand 3	D	248	252	parallel
Strand 4	D	199	202	parallel
Strand 5	D	171	172	parallel
Strand 6	D	407	408	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	298	301	first strand
Strand 2	D	334	337	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	601	604	first strand
Strand 2	D	611	614	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6MW3

Analysis of interatomic Contacts of Structural Units in PDB entry:
6MW3