Analysis of interatomic Contacts of Structural Units in PDB entry:
6MW5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MW5 entry

There is 1 chain in PDB entry 6MW5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 8GLY 266
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 6MW5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 18Right-handed 310
Helix 2
AA2
A
19 34Right-handed alpha
Helix 3
AA3
A
48 60Right-handed alpha
Helix 4
AA4
A
61 63Right-handed 310
Helix 5
AA5
A
99 107Right-handed 310
Helix 6
AA6
A
126 132Right-handed 310
Helix 7
AA7
A
158 169Right-handed alpha
Helix 8
AA8
A
178 187Right-handed alpha
Helix 9
AA9
A
189 193Right-handed 310
Helix 10
AB1
A
194 198Right-handed 310
Helix 11
AB2
A
200 204Right-handed 310
Helix 12
AB3
A
207 214Right-handed alpha
Helix 13
AB4
A
217 223Right-handed alpha
Helix 14
AB5
A
237 241Right-handed 310
Helix 15
AB6
A
246 266Right-handed alpha
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There are 2 sheets in PDB entry 6MW5. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 73first strand
Strand 2
A
39 43parallel
Strand 3
A
9 14parallel
Strand 4
A
113 116parallel
Strand 5
A
148 155anti-parallel
Strand 6
A
136 140anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
120 122first strand
Strand 2
A
229 231anti-parallel
Strand 3
A
205 206parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il