Analysis of interatomic Contacts of Structural Units in PDB entry:
6MWE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MWE entry

There are 2 chains in PDB entry 6MWE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 816GLU 1122
B
 TYR 816GLU 1122
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 6MWE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
820 822Right-handed 310
Helix 2
AA2
A
872 880Right-handed alpha
Helix 3
AA3
A
909 917Right-handed alpha
Helix 4
AA4
A
918 923Right-handed alpha
Helix 5
AA5
A
923 930Right-handed alpha
Helix 6
AA6
A
937 958Right-handed alpha
Helix 7
AA7
A
966 968Right-handed 310
Helix 8
AA8
A
974 976Right-handed 310
Helix 9
AA9
A
984 988Right-handed 310
Helix 10
AB1
A
999 1005Right-handed 310
Helix 11
AB2
A
1006 1013Right-handed alpha
Helix 12
AB3
A
1016 1033Right-handed alpha
Helix 13
AB4
A
1043 1051Right-handed alpha
Helix 14
AB5
A
1052 1054Right-handed 310
Helix 15
AB6
A
1064 1075Right-handed alpha
Helix 16
AB7
A
1078 1082Right-handed 310
Helix 17
AB8
A
1084 1098Right-handed alpha
Helix 18
AB9
A
1117 1121Right-handed 310
Helix 19
AC1
B
820 822Right-handed 310
Helix 20
AC2
B
872 880Right-handed alpha
Helix 21
AC3
B
909 917Right-handed alpha
Helix 22
AC4
B
918 923Right-handed alpha
Helix 23
AC5
B
923 930Right-handed alpha
Helix 24
AC6
B
937 958Right-handed alpha
Helix 25
AC7
B
966 968Right-handed 310
Helix 26
AC8
B
974 976Right-handed 310
Helix 27
AC9
B
984 988Right-handed 310
Helix 28
AD1
B
999 1005Right-handed 310
Helix 29
AD2
B
1006 1013Right-handed alpha
Helix 30
AD3
B
1016 1033Right-handed alpha
Helix 31
AD4
B
1043 1051Right-handed alpha
Helix 32
AD5
B
1052 1054Right-handed 310
Helix 33
AD6
B
1064 1075Right-handed alpha
Helix 34
AD7
B
1078 1082Right-handed 310
Helix 35
AD8
B
1084 1098Right-handed alpha
Helix 36
AD9
B
1117 1121Right-handed 310
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There are 4 sheets in PDB entry 6MWE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
824 833first strand
Strand 2
A
836 845anti-parallel
Strand 3
A
848 857anti-parallel
Strand 4
A
897 903anti-parallel
Strand 5
A
888 894anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
970 972first strand
Strand 2
A
978 980anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
824 833first strand
Strand 2
B
836 845anti-parallel
Strand 3
B
848 855anti-parallel
Strand 4
B
898 903anti-parallel
Strand 5
B
888 893anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
970 972first strand
Strand 2
B
978 980anti-parallel
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