Analysis of interatomic Contacts of Structural Units in PDB entry:
6MX1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MX1 entry

There are 2 chains in PDB entry 6MX1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 305PHE 460
B
 VAL 306PHE 460
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 11 helices in PDB entry 6MX1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
330 342Right-handed alpha
Helix 2
AA2
A
366 378Right-handed alpha
Helix 3
AA3
A
378 384Right-handed alpha
Helix 4
AA4
A
408 423Right-handed alpha
Helix 5
AA5
A
447 460Right-handed alpha
Helix 6
AA6
B
322 326Right-handed 310
Helix 7
AA7
B
330 342Right-handed alpha
Helix 8
AA8
B
366 378Right-handed alpha
Helix 9
AA9
B
378 384Right-handed alpha
Helix 10
AB1
B
408 423Right-handed alpha
Helix 11
AB2
B
447 460Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 6MX1.

There are 13 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
306 320first strand
Strand 2
A
358 363anti-parallel
Strand 3
A
348 351anti-parallel
Strand 4
B
429 432anti-parallel
Strand 5
B
438 444anti-parallel
Strand 6
B
391 402anti-parallel
Strand 7
B
308 320anti-parallel
Strand 8
B
358 363anti-parallel
Strand 9
B
348 351anti-parallel
Strand 10
A
429 432anti-parallel
Strand 11
A
438 444anti-parallel
Strand 12
A
391 403anti-parallel
Strand 13
A
306 320anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il