Analysis of interatomic Contacts of Structural Units in PDB entry:
6MX7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6MX7 entry

There are 4 chains in PDB entry 6MX7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	LYS 82	TRP 261
F	LYS 91	TRP 261
I	LYS 91	TRP 261
L	PRO 85	TRP 261

There are 9 helices in PDB entry 6MX7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	105	111	Right-handed alpha
Helix 2	AA2	C	167	171	Right-handed 310
Helix 3	AA3	F	106	111	Right-handed alpha
Helix 4	AA4	F	145	150	Right-handed alpha
Helix 5	AA5	F	167	172	Right-handed alpha
Helix 6	AA6	I	145	150	Right-handed alpha
Helix 7	AA7	I	167	172	Right-handed alpha
Helix 8	AA8	L	147	151	Right-handed 310
Helix 9	AA9	L	157	159	Right-handed 310

There are 16 sheets in PDB entry 6MX7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	142	143	first strand
Strand 2	C	113	118	anti-parallel
Strand 3	C	121	128	anti-parallel
Strand 4	C	133	136	anti-parallel
Strand 5	C	161	162	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	186	188	first strand
Strand 2	C	191	193	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	201	203	first strand
Strand 2	C	236	238	anti-parallel
Strand 3	C	232	233	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	225	227	first strand
Strand 2	C	241	244	anti-parallel
Strand 3	C	250	253	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	113	114	first strand
Strand 2	F	126	129	anti-parallel
Strand 3	F	132	136	anti-parallel
Strand 4	F	161	165	anti-parallel
Strand 5	F	153	156	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	116	117	first strand
Strand 2	F	141	142	anti-parallel

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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	232	233	first strand
Strand 2	F	250	252	first strand
Strand 3	F	199	203	first strand
Strand 4	F	191	196	anti-parallel
Strand 5	F	185	188	anti-parallel
Strand 6	F	215	217	anti-parallel
Strand 7	F	223	229	anti-parallel
Strand 8	F	236	244	anti-parallel
Strand 9	F	250	252	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	132	134	first strand
Strand 2	I	121	129	anti-parallel
Strand 3	I	114	118	anti-parallel
Strand 4	I	142	143	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	154	155	first strand
Strand 2	I	162	163	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	185	187	first strand
Strand 2	I	192	195	anti-parallel
Strand 3	I	200	203	anti-parallel
Strand 4	I	236	240	anti-parallel
Strand 5	I	229	233	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	215	217	first strand
Strand 2	I	223	226	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	115	118	first strand
Strand 2	L	121	125	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	127	129	first strand
Strand 2	L	132	136	anti-parallel
Strand 3	L	161	163	anti-parallel
Strand 4	L	154	156	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	176	177	first strand
Strand 2	L	222	230	parallel
Strand 3	L	236	244	anti-parallel
Strand 4	L	232	233	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	215	217	first strand
Strand 2	L	222	230	anti-parallel
Strand 3	L	259	260	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	185	186	first strand
Strand 2	L	193	196	anti-parallel
Strand 3	L	199	203	anti-parallel
Strand 4	L	236	244	anti-parallel
Strand 5	L	250	253	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6MX7

Analysis of interatomic Contacts of Structural Units in PDB entry:
6MX7