Analysis of interatomic Contacts of Structural Units in PDB entry:
6MXG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MXG entry

There are 2 chains in PDB entry 6MXG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 4LYS 197
B
 CYS 5GLU 200
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 6MXG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 35Right-handed alpha
Helix 2
AA2
A
55 64Right-handed alpha
Helix 3
AA3
A
119 131Right-handed alpha
Helix 4
AA4
A
146 149Right-handed 310
Helix 5
AA5
A
189 194Right-handed alpha
Helix 6
AA6
B
16 35Right-handed alpha
Helix 7
AA7
B
56 69Right-handed alpha
Helix 8
AA8
B
119 129Right-handed alpha
Helix 9
AA9
B
146 149Right-handed 310
Helix 10
AB1
B
188 195Right-handed alpha
Helix 11
AB2
B
196 199Right-handed 310
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There are 4 sheets in PDB entry 6MXG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 15first strand
Strand 2
A
184 187anti-parallel
Strand 3
A
167 168anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 78first strand
Strand 2
A
47 51parallel
Strand 3
A
109 116parallel
Strand 4
A
137 144parallel
Strand 5
A
157 158parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 15first strand
Strand 2
B
184 187anti-parallel
Strand 3
B
167 168anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
74 79first strand
Strand 2
B
47 52parallel
Strand 3
B
109 116parallel
Strand 4
B
137 144parallel
Strand 5
B
157 161parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il