Analysis of interatomic Contacts of Structural Units in PDB entry:
6MYX

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6MYX entry

There are 4 chains in PDB entry 6MYX (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	ASN 4	THR 687
D	ASN 4	THR 687
I	ASN 4	THR 687
J	ASN 4	THR 687

There are128 helices in PDB entry 6MYX. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	7	15	Right-handed alpha
Helix 2	AA2	C	16	18	Right-handed 310
Helix 3	AA3	C	27	40	Right-handed alpha
Helix 4	AA4	C	50	61	Right-handed alpha
Helix 5	AA5	C	65	70	Right-handed alpha
Helix 6	AA6	C	73	86	Right-handed alpha
Helix 7	AA7	C	93	101	Right-handed alpha
Helix 8	AA8	C	117	131	Right-handed alpha
Helix 9	AA9	C	134	145	Right-handed alpha
Helix 10	AB1	C	152	158	Right-handed alpha
Helix 11	AB2	C	178	194	Right-handed alpha
Helix 12	AB3	C	222	234	Right-handed alpha
Helix 13	AB4	C	235	237	Right-handed 310
Helix 14	AB5	C	257	263	Right-handed alpha
Helix 15	AB6	C	285	294	Right-handed alpha
Helix 16	AB7	C	302	310	Right-handed alpha
Helix 17	AB8	C	313	317	Right-handed 310
Helix 18	AB9	C	318	329	Right-handed alpha
Helix 19	AC1	C	338	353	Right-handed alpha
Helix 20	AC2	C	360	366	Right-handed alpha
Helix 21	AC3	C	416	423	Right-handed alpha
Helix 22	AC4	C	424	443	Right-handed alpha
Helix 23	AC5	C	448	459	Right-handed alpha
Helix 24	AC6	C	468	475	Right-handed alpha
Helix 25	AC7	C	481	510	Right-handed alpha
Helix 26	AC8	C	525	530	Right-handed alpha
Helix 27	AC9	C	540	548	Right-handed alpha
Helix 28	AD1	C	554	568	Right-handed alpha
Helix 29	AD2	C	581	585	Right-handed 310
Helix 30	AD3	C	628	632	Right-handed 310
Helix 31	AD4	C	633	646	Right-handed alpha
Helix 32	AD5	C	663	677	Right-handed alpha
Helix 33	AD6	D	7	15	Right-handed alpha
Helix 34	AD7	D	16	18	Right-handed 310
Helix 35	AD8	D	27	40	Right-handed alpha
Helix 36	AD9	D	50	61	Right-handed alpha
Helix 37	AE1	D	65	70	Right-handed alpha
Helix 38	AE2	D	73	86	Right-handed alpha
Helix 39	AE3	D	93	101	Right-handed alpha
Helix 40	AE4	D	117	131	Right-handed alpha
Helix 41	AE5	D	134	145	Right-handed alpha
Helix 42	AE6	D	152	158	Right-handed alpha
Helix 43	AE7	D	178	194	Right-handed alpha
Helix 44	AE8	D	222	234	Right-handed alpha
Helix 45	AE9	D	235	237	Right-handed 310
Helix 46	AF1	D	257	263	Right-handed alpha
Helix 47	AF2	D	285	294	Right-handed alpha
Helix 48	AF3	D	302	310	Right-handed alpha
Helix 49	AF4	D	313	317	Right-handed 310
Helix 50	AF5	D	318	329	Right-handed alpha
Helix 51	AF6	D	338	353	Right-handed alpha
Helix 52	AF7	D	360	366	Right-handed alpha
Helix 53	AF8	D	416	423	Right-handed alpha
Helix 54	AF9	D	424	443	Right-handed alpha
Helix 55	AG1	D	448	459	Right-handed alpha
Helix 56	AG2	D	468	475	Right-handed alpha
Helix 57	AG3	D	481	510	Right-handed alpha
Helix 58	AG4	D	525	530	Right-handed alpha
Helix 59	AG5	D	540	548	Right-handed alpha
Helix 60	AG6	D	554	568	Right-handed alpha
Helix 61	AG7	D	581	585	Right-handed 310
Helix 62	AG8	D	628	632	Right-handed 310
Helix 63	AG9	D	633	646	Right-handed alpha
Helix 64	AH1	D	663	677	Right-handed alpha
Helix 65	AH2	I	7	15	Right-handed alpha
Helix 66	AH3	I	16	18	Right-handed 310
Helix 67	AH4	I	27	40	Right-handed alpha
Helix 68	AH5	I	50	61	Right-handed alpha
Helix 69	AH6	I	65	70	Right-handed alpha
Helix 70	AH7	I	73	86	Right-handed alpha
Helix 71	AH8	I	93	101	Right-handed alpha
Helix 72	AH9	I	117	131	Right-handed alpha
Helix 73	AI1	I	134	145	Right-handed alpha
Helix 74	AI2	I	152	158	Right-handed alpha
Helix 75	AI3	I	178	194	Right-handed alpha
Helix 76	AI4	I	222	234	Right-handed alpha
Helix 77	AI5	I	235	237	Right-handed 310
Helix 78	AI6	I	257	263	Right-handed alpha
Helix 79	AI7	I	285	294	Right-handed alpha
Helix 80	AI8	I	302	310	Right-handed alpha
Helix 81	AI9	I	313	317	Right-handed 310
Helix 82	AJ1	I	318	329	Right-handed alpha
Helix 83	AJ2	I	338	353	Right-handed alpha
Helix 84	AJ3	I	360	366	Right-handed alpha
Helix 85	AJ4	I	416	423	Right-handed alpha
Helix 86	AJ5	I	424	443	Right-handed alpha
Helix 87	AJ6	I	448	459	Right-handed alpha
Helix 88	AJ7	I	468	475	Right-handed alpha
Helix 89	AJ8	I	481	510	Right-handed alpha
Helix 90	AJ9	I	525	530	Right-handed alpha
Helix 91	AK1	I	540	548	Right-handed alpha
Helix 92	AK2	I	554	568	Right-handed alpha
Helix 93	AK3	I	581	585	Right-handed 310
Helix 94	AK4	I	628	632	Right-handed 310
Helix 95	AK5	I	633	646	Right-handed alpha
Helix 96	AK6	I	663	677	Right-handed alpha
Helix 97	AK7	J	7	15	Right-handed alpha
Helix 98	AK8	J	16	18	Right-handed 310
Helix 99	AK9	J	27	40	Right-handed alpha
Helix 100	AL1	J	50	61	Right-handed alpha
Helix 101	AL2	J	65	70	Right-handed alpha
Helix 102	AL3	J	73	86	Right-handed alpha
Helix 103	AL4	J	93	101	Right-handed alpha
Helix 104	AL5	J	117	131	Right-handed alpha
Helix 105	AL6	J	134	145	Right-handed alpha
Helix 106	AL7	J	152	158	Right-handed alpha
Helix 107	AL8	J	178	194	Right-handed alpha
Helix 108	AL9	J	222	234	Right-handed alpha
Helix 109	AM1	J	235	237	Right-handed 310
Helix 110	AM2	J	257	263	Right-handed alpha
Helix 111	AM3	J	285	294	Right-handed alpha
Helix 112	AM4	J	302	310	Right-handed alpha
Helix 113	AM5	J	313	317	Right-handed 310
Helix 114	AM6	J	318	329	Right-handed alpha
Helix 115	AM7	J	338	353	Right-handed alpha
Helix 116	AM8	J	360	366	Right-handed alpha
Helix 117	AM9	J	416	423	Right-handed alpha
Helix 118	AN1	J	424	443	Right-handed alpha
Helix 119	AN2	J	448	459	Right-handed alpha
Helix 120	AN3	J	468	475	Right-handed alpha
Helix 121	AN4	J	481	510	Right-handed alpha
Helix 122	AN5	J	525	530	Right-handed alpha
Helix 123	AN6	J	540	548	Right-handed alpha
Helix 124	AN7	J	554	568	Right-handed alpha
Helix 125	AN8	J	581	585	Right-handed 310
Helix 126	AN9	J	628	632	Right-handed 310
Helix 127	AO1	J	633	646	Right-handed alpha
Helix 128	AO2	J	663	677	Right-handed alpha

There are 16 sheets in PDB entry 6MYX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	149	151	first strand
Strand 2	C	412	415	anti-parallel
Strand 3	C	464	466	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	171	172	first strand
Strand 2	C	199	202	parallel
Strand 3	C	247	252	parallel
Strand 4	C	281	283	parallel
Strand 5	C	357	359	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	298	301	first strand
Strand 2	C	334	337	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	601	604	first strand
Strand 2	C	611	614	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	149	151	first strand
Strand 2	D	412	415	anti-parallel
Strand 3	D	464	466	parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	171	172	first strand
Strand 2	D	199	202	parallel
Strand 3	D	247	252	parallel
Strand 4	D	281	283	parallel
Strand 5	D	357	359	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	298	301	first strand
Strand 2	D	334	337	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	601	604	first strand
Strand 2	D	611	614	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	149	151	first strand
Strand 2	I	412	415	anti-parallel
Strand 3	I	464	466	parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	171	172	first strand
Strand 2	I	199	202	parallel
Strand 3	I	247	252	parallel
Strand 4	I	281	283	parallel
Strand 5	I	357	359	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	298	301	first strand
Strand 2	I	334	337	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	601	604	first strand
Strand 2	I	611	614	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	149	151	first strand
Strand 2	J	412	415	anti-parallel
Strand 3	J	464	466	parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	171	172	first strand
Strand 2	J	199	202	parallel
Strand 3	J	247	252	parallel
Strand 4	J	281	283	parallel
Strand 5	J	357	359	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	298	301	first strand
Strand 2	J	334	337	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	601	604	first strand
Strand 2	J	611	614	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6MYX

Analysis of interatomic Contacts of Structural Units in PDB entry:
6MYX