Analysis of interatomic Contacts of Structural Units in PDB entry:
6MZO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MZO entry

There is 1 chain in PDB entry 6MZO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 25GLN 377
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 6MZO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
44 63Right-handed alpha
Helix 2
AA2
A
108 123Right-handed alpha
Helix 3
AA3
A
143 148Right-handed alpha
Helix 4
AA4
A
161 170Right-handed alpha
Helix 5
AA5
A
186 193Right-handed alpha
Helix 6
AA6
A
213 223Right-handed alpha
Helix 7
AA7
A
227 240Right-handed alpha
Helix 8
AA8
A
253 266Right-handed alpha
Helix 9
AA9
A
269 275Right-handed alpha
Helix 10
AB1
A
277 281Right-handed 310
Helix 11
AB2
A
297 303Right-handed alpha
Helix 12
AB3
A
306 320Right-handed alpha
Helix 13
AB4
A
359 367Right-handed alpha
Helix 14
AB5
A
369 376Right-handed alpha
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There are 3 sheets in PDB entry 6MZO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
91 99first strand
Strand 2
A
81 88anti-parallel
Strand 3
A
68 73anti-parallel
Strand 4
A
33 38parallel
Strand 5
A
128 134parallel
Strand 6
A
174 181parallel
Strand 7
A
197 202parallel
Strand 8
A
245 250anti-parallel
Strand 9
A
321 326anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
294 296first strand
Strand 2
A
351 353anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
329 332first strand
Strand 2
A
340 343anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il