Analysis of interatomic Contacts of Structural Units in PDB entry:
6MZP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MZP entry

There are 2 chains in PDB entry 6MZP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 30GLU 359
B
 PRO 30LEU 357
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 6MZP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
160 172Right-handed alpha
Helix 2
AA2
A
305 312Right-handed alpha
Helix 3
AA3
A
325 336Right-handed alpha
Helix 4
AA4
B
160 170Right-handed alpha
Helix 5
AA5
B
305 311Right-handed alpha
Helix 6
AA6
B
325 336Right-handed alpha
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There are 8 sheets in PDB entry 6MZP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 35first strand
Strand 2
A
223 226anti-parallel
Strand 3
A
343 349anti-parallel
Strand 4
A
234 243parallel
Strand 5
A
270 277parallel
Strand 6
A
293 297parallel
Strand 7
A
313 314parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 141first strand
Strand 2
A
114 120parallel
Strand 3
A
85 93parallel
Strand 4
A
186 191parallel
Strand 5
A
212 220anti-parallel
Strand 6
A
42 49anti-parallel
Strand 7
A
352 357anti-parallel
Strand 8
A
252 260parallel
Strand 9
A
281 287parallel
Strand 10
A
301 304parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 56first strand
Strand 2
A
177 181anti-parallel
Strand 3
A
66 72parallel
Strand 4
A
104 109parallel
Strand 5
A
129 133parallel
Strand 6
A
150 154parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
267 268first strand
Strand 2
A
290 291parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
34 35first strand
Strand 2
B
223 226anti-parallel
Strand 3
B
343 349anti-parallel
Strand 4
B
235 243parallel
Strand 5
B
271 277parallel
Strand 6
B
290 297parallel
Strand 7
B
267 268parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
34 35first strand
Strand 2
B
223 226anti-parallel
Strand 3
B
343 349anti-parallel
Strand 4
B
235 243parallel
Strand 5
B
271 277parallel
Strand 6
B
290 297parallel
Strand 7
B
312 314parallel
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There are 10 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
138 139first strand
Strand 2
B
114 119parallel
Strand 3
B
85 93parallel
Strand 4
B
186 191parallel
Strand 5
B
212 220anti-parallel
Strand 6
B
42 49anti-parallel
Strand 7
B
352 357anti-parallel
Strand 8
B
252 260parallel
Strand 9
B
281 287parallel
Strand 10
B
301 304parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
51 56first strand
Strand 2
B
177 181anti-parallel
Strand 3
B
67 72parallel
Strand 4
B
105 109parallel
Strand 5
B
130 133parallel
Strand 6
B
151 154parallel
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