Analysis of interatomic Contacts of Structural Units in PDB entry:
6N0X

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6N0X entry

There are 6 chains in PDB entry 6N0X (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 0	GLU 323
B	GLY 0	GLU 323
C	GLY 0	LEU 326
D	MET 1	SER 325
E	MET 1	ILE 322
F	MET 1	GLN 324

There are 73 helices in PDB entry 6N0X. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	65	84	Right-handed alpha
Helix 2	AA2	A	105	121	Right-handed alpha
Helix 3	AA3	A	126	138	Right-handed alpha
Helix 4	AA4	A	139	144	Right-handed 310
Helix 5	AA5	A	168	172	Right-handed 310
Helix 6	AA6	A	189	197	Right-handed alpha
Helix 7	AA7	A	198	200	Right-handed 310
Helix 8	AA8	A	202	209	Right-handed alpha
Helix 9	AA9	A	209	224	Right-handed alpha
Helix 10	AB1	A	225	246	Right-handed alpha
Helix 11	AB2	A	255	271	Right-handed alpha
Helix 12	AB3	A	293	303	Right-handed alpha
Helix 13	AB4	B	65	84	Right-handed alpha
Helix 14	AB5	B	105	121	Right-handed alpha
Helix 15	AB6	B	126	138	Right-handed alpha
Helix 16	AB7	B	139	144	Right-handed 310
Helix 17	AB8	B	168	172	Right-handed 310
Helix 18	AB9	B	189	197	Right-handed alpha
Helix 19	AC1	B	198	200	Right-handed 310
Helix 20	AC2	B	202	209	Right-handed alpha
Helix 21	AC3	B	209	224	Right-handed alpha
Helix 22	AC4	B	225	246	Right-handed alpha
Helix 23	AC5	B	255	272	Right-handed alpha
Helix 24	AC6	B	293	303	Right-handed alpha
Helix 25	AC7	C	65	84	Right-handed alpha
Helix 26	AC8	C	105	121	Right-handed alpha
Helix 27	AC9	C	126	138	Right-handed alpha
Helix 28	AD1	C	139	144	Right-handed 310
Helix 29	AD2	C	157	161	Right-handed 310
Helix 30	AD3	C	168	172	Right-handed 310
Helix 31	AD4	C	189	197	Right-handed alpha
Helix 32	AD5	C	198	200	Right-handed 310
Helix 33	AD6	C	202	209	Right-handed alpha
Helix 34	AD7	C	209	224	Right-handed alpha
Helix 35	AD8	C	225	246	Right-handed alpha
Helix 36	AD9	C	255	271	Right-handed alpha
Helix 37	AE1	C	293	303	Right-handed alpha
Helix 38	AE2	D	65	84	Right-handed alpha
Helix 39	AE3	D	105	121	Right-handed alpha
Helix 40	AE4	D	126	138	Right-handed alpha
Helix 41	AE5	D	140	145	Right-handed alpha
Helix 42	AE6	D	157	161	Right-handed 310
Helix 43	AE7	D	168	172	Right-handed 310
Helix 44	AE8	D	189	197	Right-handed alpha
Helix 45	AE9	D	198	200	Right-handed 310
Helix 46	AF1	D	202	209	Right-handed alpha
Helix 47	AF2	D	209	224	Right-handed alpha
Helix 48	AF3	D	225	246	Right-handed alpha
Helix 49	AF4	D	255	271	Right-handed alpha
Helix 50	AF5	D	293	303	Right-handed alpha
Helix 51	AF6	E	65	84	Right-handed alpha
Helix 52	AF7	E	105	121	Right-handed alpha
Helix 53	AF8	E	126	138	Right-handed alpha
Helix 54	AF9	E	139	144	Right-handed 310
Helix 55	AG1	E	168	172	Right-handed 310
Helix 56	AG2	E	189	197	Right-handed alpha
Helix 57	AG3	E	198	200	Right-handed 310
Helix 58	AG4	E	202	209	Right-handed alpha
Helix 59	AG5	E	209	224	Right-handed alpha
Helix 60	AG6	E	225	246	Right-handed alpha
Helix 61	AG7	E	255	271	Right-handed alpha
Helix 62	AG8	E	293	303	Right-handed alpha
Helix 63	AG9	F	65	84	Right-handed alpha
Helix 64	AH1	F	105	121	Right-handed alpha
Helix 65	AH2	F	126	138	Right-handed alpha
Helix 66	AH3	F	139	145	Right-handed 310
Helix 67	AH4	F	168	172	Right-handed 310
Helix 68	AH5	F	189	197	Right-handed alpha
Helix 69	AH6	F	198	200	Right-handed 310
Helix 70	AH7	F	202	224	Right-handed alpha
Helix 71	AH8	F	225	246	Right-handed alpha
Helix 72	AH9	F	255	271	Right-handed alpha
Helix 73	AI1	F	293	303	Right-handed alpha

There are 24 sheets in PDB entry 6N0X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	62	63	first strand
Strand 2	A	56	59	anti-parallel
Strand 3	A	88	95	parallel
Strand 4	A	42	49	anti-parallel
Strand 5	A	2	8	anti-parallel
Strand 6	A	320	322	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	11	15	first strand
Strand 2	A	32	36	anti-parallel
Strand 3	A	149	153	anti-parallel
Strand 4	A	162	167	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	20	22	first strand
Strand 2	A	27	28	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	276	278	first strand
Strand 2	A	285	290	anti-parallel
Strand 3	A	174	181	anti-parallel
Strand 4	A	307	314	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	62	63	first strand
Strand 2	B	56	59	anti-parallel
Strand 3	B	88	95	parallel
Strand 4	B	42	49	anti-parallel
Strand 5	B	2	8	anti-parallel
Strand 6	B	320	322	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	11	15	first strand
Strand 2	B	32	36	anti-parallel
Strand 3	B	149	153	anti-parallel
Strand 4	B	162	167	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	20	22	first strand
Strand 2	B	27	28	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	276	278	first strand
Strand 2	B	285	290	anti-parallel
Strand 3	B	174	181	anti-parallel
Strand 4	B	307	314	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	62	63	first strand
Strand 2	C	56	59	anti-parallel
Strand 3	C	88	95	parallel
Strand 4	C	42	49	anti-parallel
Strand 5	C	2	8	anti-parallel
Strand 6	C	320	322	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	11	15	first strand
Strand 2	C	32	36	anti-parallel
Strand 3	C	149	153	anti-parallel
Strand 4	C	162	167	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	20	22	first strand
Strand 2	C	27	28	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	276	278	first strand
Strand 2	C	285	290	anti-parallel
Strand 3	C	174	181	anti-parallel
Strand 4	C	307	314	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	62	63	first strand
Strand 2	D	56	59	anti-parallel
Strand 3	D	88	95	parallel
Strand 4	D	42	49	anti-parallel
Strand 5	D	2	8	anti-parallel
Strand 6	D	320	322	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	11	15	first strand
Strand 2	D	32	36	anti-parallel
Strand 3	D	149	153	anti-parallel
Strand 4	D	162	167	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	20	22	first strand
Strand 2	D	27	28	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	276	278	first strand
Strand 2	D	285	290	anti-parallel
Strand 3	D	174	181	anti-parallel
Strand 4	D	307	314	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	62	63	first strand
Strand 2	E	56	59	anti-parallel
Strand 3	E	88	95	parallel
Strand 4	E	42	49	anti-parallel
Strand 5	E	3	8	anti-parallel
Strand 6	E	320	322	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	11	15	first strand
Strand 2	E	32	36	anti-parallel
Strand 3	E	149	153	anti-parallel
Strand 4	E	162	167	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	20	22	first strand
Strand 2	E	27	28	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	276	278	first strand
Strand 2	E	285	290	anti-parallel
Strand 3	E	174	181	anti-parallel
Strand 4	E	307	314	anti-parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	62	63	first strand
Strand 2	F	56	59	anti-parallel
Strand 3	F	88	95	parallel
Strand 4	F	42	49	anti-parallel
Strand 5	F	2	8	anti-parallel
Strand 6	F	320	322	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	11	15	first strand
Strand 2	F	32	36	anti-parallel
Strand 3	F	149	153	anti-parallel
Strand 4	F	162	167	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	20	22	first strand
Strand 2	F	27	28	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	276	278	first strand
Strand 2	F	285	290	anti-parallel
Strand 3	F	174	180	anti-parallel
Strand 4	F	309	314	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6N0X

Analysis of interatomic Contacts of Structural Units in PDB entry:
6N0X