Analysis of interatomic Contacts of Structural Units in PDB entry:
6N10


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6N10 entry

There is 1 chain in PDB entry 6N10 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 3LYS 412
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 6N10. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
76 88Right-handed alpha
Helix 2
AA2
A
103 109Right-handed 310
Helix 3
AA3
A
127 144Right-handed alpha
Helix 4
AA4
A
149 159Right-handed alpha
Helix 5
AA5
A
160 169Right-handed 310
Helix 6
AA6
A
215 227Right-handed alpha
Helix 7
AA7
A
229 237Right-handed alpha
Helix 8
AA8
A
237 251Right-handed alpha
Helix 9
AA9
A
253 274Right-handed alpha
Helix 10
AB1
A
283 299Right-handed alpha
Helix 11
AB2
A
321 336Right-handed alpha
Helix 12
AB3
A
343 347Right-handed alpha
Helix 13
AB4
A
368 373Right-handed alpha
Helix 14
AB5
A
398 402Right-handed 310
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There are 5 sheets in PDB entry 6N10. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 72first strand
Strand 2
A
64 67anti-parallel
Strand 3
A
112 118parallel
Strand 4
A
50 56anti-parallel
Strand 5
A
8 14anti-parallel
Strand 6
A
394 395anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 21first strand
Strand 2
A
38 42anti-parallel
Strand 3
A
172 175anti-parallel
Strand 4
A
188 192anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 28first strand
Strand 2
A
33 34anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
93 95first strand
Strand 2
A
100 102anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
305 309first strand
Strand 2
A
315 319anti-parallel
Strand 3
A
201 207anti-parallel
Strand 4
A
381 387anti-parallel
Strand 5
A
348 349parallel
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