Analysis of interatomic Contacts of Structural Units in PDB entry:
6N1E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6N1E entry

There is 1 chain in PDB entry 6N1E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 448
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 6N1E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 35Right-handed alpha
Helix 2
AA2
A
49 64Right-handed alpha
Helix 3
AA3
A
75 86Right-handed alpha
Helix 4
AA4
A
110 114Right-handed 310
Helix 5
AA5
A
117 120Right-handed 310
Helix 6
AA6
A
121 132Right-handed alpha
Helix 7
AA7
A
149 158Right-handed alpha
Helix 8
AA8
A
159 160Right-handed 310
Helix 9
AA9
A
161 165Right-handed 310
Helix 10
AB1
A
178 187Right-handed alpha
Helix 11
AB2
A
188 190Right-handed 310
Helix 12
AB3
A
214 229Right-handed alpha
Helix 13
AB4
A
254 270Right-handed alpha
Helix 14
AB5
A
282 292Right-handed alpha
Helix 15
AB6
A
302 314Right-handed alpha
Helix 16
AB7
A
329 331Right-handed 310
Helix 17
AB8
A
337 351Right-handed alpha
Helix 18
AB9
A
353 365Right-handed alpha
Helix 19
AC1
A
377 390Right-handed alpha
Helix 20
AC2
A
391 393Right-handed 310
Helix 21
AC3
A
431 448Right-handed alpha
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There are 4 sheets in PDB entry 6N1E. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 14first strand
Strand 2
A
103 109anti-parallel
Strand 3
A
90 94anti-parallel
Strand 4
A
40 44parallel
Strand 5
A
68 73parallel
Strand 6
A
143 145parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 197first strand
Strand 2
A
169 173parallel
Strand 3
A
232 236parallel
Strand 4
A
243 246anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
295 298first strand
Strand 2
A
274 277parallel
Strand 3
A
317 320parallel
Strand 4
A
324 327anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
371 373first strand
Strand 2
A
422 428anti-parallel
Strand 3
A
409 415anti-parallel
Strand 4
A
402 405anti-parallel
Strand 5
A
395 397anti-parallel
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