Analysis of interatomic Contacts of Structural Units in PDB entry:
6N1Z

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6N1Z entry

There is 1 chain in PDB entry 6N1Z (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 15	VAL 652

There are138 helices in PDB entry 6N1Z. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	15	33	Right-handed alpha
Helix 2	AA2	A	36	51	Right-handed alpha
Helix 3	AA3	A	55	66	Right-handed alpha
Helix 4	AA4	A	70	89	Right-handed alpha
Helix 5	AA5	A	102	113	Right-handed alpha
Helix 6	AA6	A	114	119	Right-handed 310
Helix 7	AA7	A	121	140	Right-handed alpha
Helix 8	AA8	A	146	157	Right-handed alpha
Helix 9	AA9	A	159	175	Right-handed alpha
Helix 10	AB1	A	181	199	Right-handed alpha
Helix 11	AB2	A	204	229	Right-handed alpha
Helix 12	AB3	A	237	253	Right-handed alpha
Helix 13	AB4	A	261	279	Right-handed alpha
Helix 14	AB5	A	279	284	Right-handed alpha
Helix 15	AB6	A	286	309	Right-handed alpha
Helix 16	AB7	A	328	345	Right-handed alpha
Helix 17	AB8	A	349	368	Right-handed alpha
Helix 18	AB9	A	371	381	Right-handed alpha
Helix 19	AC1	A	381	389	Right-handed alpha
Helix 20	AC2	A	397	413	Right-handed alpha
Helix 21	AC3	A	413	438	Right-handed alpha
Helix 22	AC4	A	440	442	Right-handed 310
Helix 23	AC5	A	443	457	Right-handed alpha
Helix 24	AC6	A	457	467	Right-handed alpha
Helix 25	AC7	A	473	481	Right-handed alpha
Helix 26	AC8	A	481	487	Right-handed alpha
Helix 27	AC9	A	491	505	Right-handed alpha
Helix 28	AD1	A	506	509	Right-handed 310
Helix 29	AD2	A	510	526	Right-handed alpha
Helix 30	AD3	A	530	551	Right-handed alpha
Helix 31	AD4	A	553	559	Right-handed 310
Helix 32	AD5	A	560	573	Right-handed alpha
Helix 33	AD6	A	576	591	Right-handed alpha
Helix 34	AD7	A	594	601	Right-handed alpha
Helix 35	AD8	A	601	616	Right-handed alpha
Helix 36	AD9	A	619	635	Right-handed alpha
Helix 37	AE1	A	636	657	Right-handed alpha
Helix 38	AE2	A	658	662	Right-handed 310
Helix 39	AE3	A	665	681	Right-handed alpha
Helix 40	AE4	A	686	692	Right-handed alpha
Helix 41	AE5	A	692	704	Right-handed alpha
Helix 42	AE6	A	706	724	Right-handed alpha
Helix 43	AE7	A	724	731	Right-handed alpha
Helix 44	AE8	A	738	751	Right-handed alpha
Helix 45	AE9	A	756	761	Right-handed 310
Helix 46	AF1	A	762	774	Right-handed alpha
Helix 47	AF2	A	779	796	Right-handed alpha
Helix 48	AF3	A	798	816	Right-handed alpha
Helix 49	AF4	A	816	826	Right-handed alpha
Helix 50	AF5	A	834	845	Right-handed alpha
Helix 51	AF6	A	846	850	Right-handed 310
Helix 52	AF7	A	852	873	Right-handed alpha
Helix 53	AF8	A	875	880	Right-handed alpha
Helix 54	AF9	A	897	903	Right-handed alpha
Helix 55	AG1	A	913	933	Right-handed alpha
Helix 56	AG2	A	997	1002	Right-handed 310
Helix 57	AG3	A	1003	1017	Right-handed alpha
Helix 58	AG4	A	1020	1026	Right-handed alpha
Helix 59	AG5	A	1029	1038	Right-handed alpha
Helix 60	AG6	B	19	23	Right-handed 310
Helix 61	AG7	B	27	38	Right-handed alpha
Helix 62	AG8	B	46	74	Right-handed alpha
Helix 63	AG9	B	80	90	Right-handed alpha
Helix 64	AH1	B	91	102	Right-handed alpha
Helix 65	AH2	C	35	47	Right-handed alpha
Helix 66	AH3	C	53	82	Right-handed alpha
Helix 67	AH4	C	88	100	Right-handed alpha
Helix 68	AH5	C	102	120	Right-handed alpha
Helix 69	AH6	D	16	33	Right-handed alpha
Helix 70	AH7	D	36	51	Right-handed alpha
Helix 71	AH8	D	55	66	Right-handed alpha
Helix 72	AH9	D	70	89	Right-handed alpha
Helix 73	AI1	D	102	113	Right-handed alpha
Helix 74	AI2	D	114	119	Right-handed 310
Helix 75	AI3	D	121	140	Right-handed alpha
Helix 76	AI4	D	146	157	Right-handed alpha
Helix 77	AI5	D	159	175	Right-handed alpha
Helix 78	AI6	D	181	199	Right-handed alpha
Helix 79	AI7	D	204	229	Right-handed alpha
Helix 80	AI8	D	238	253	Right-handed alpha
Helix 81	AI9	D	261	279	Right-handed alpha
Helix 82	AJ1	D	279	284	Right-handed alpha
Helix 83	AJ2	D	286	309	Right-handed alpha
Helix 84	AJ3	D	329	345	Right-handed alpha
Helix 85	AJ4	D	349	355	Right-handed alpha
Helix 86	AJ5	D	356	368	Right-handed alpha
Helix 87	AJ6	D	371	381	Right-handed alpha
Helix 88	AJ7	D	381	389	Right-handed alpha
Helix 89	AJ8	D	397	413	Right-handed alpha
Helix 90	AJ9	D	413	438	Right-handed alpha
Helix 91	AK1	D	440	442	Right-handed 310
Helix 92	AK2	D	443	457	Right-handed alpha
Helix 93	AK3	D	457	467	Right-handed alpha
Helix 94	AK4	D	473	481	Right-handed alpha
Helix 95	AK5	D	481	487	Right-handed alpha
Helix 96	AK6	D	491	505	Right-handed alpha
Helix 97	AK7	D	506	509	Right-handed 310
Helix 98	AK8	D	510	526	Right-handed alpha
Helix 99	AK9	D	530	551	Right-handed alpha
Helix 100	AL1	D	553	559	Right-handed 310
Helix 101	AL2	D	560	573	Right-handed alpha
Helix 102	AL3	D	576	594	Right-handed alpha
Helix 103	AL4	D	594	601	Right-handed alpha
Helix 104	AL5	D	601	616	Right-handed alpha
Helix 105	AL6	D	619	635	Right-handed alpha
Helix 106	AL7	D	636	657	Right-handed alpha
Helix 107	AL8	D	665	681	Right-handed alpha
Helix 108	AL9	D	686	692	Right-handed alpha
Helix 109	AM1	D	692	704	Right-handed alpha
Helix 110	AM2	D	706	724	Right-handed alpha
Helix 111	AM3	D	724	731	Right-handed alpha
Helix 112	AM4	D	738	751	Right-handed alpha
Helix 113	AM5	D	756	761	Right-handed 310
Helix 114	AM6	D	762	774	Right-handed alpha
Helix 115	AM7	D	779	796	Right-handed alpha
Helix 116	AM8	D	798	814	Right-handed alpha
Helix 117	AM9	D	816	826	Right-handed alpha
Helix 118	AN1	D	834	845	Right-handed alpha
Helix 119	AN2	D	846	850	Right-handed 310
Helix 120	AN3	D	852	873	Right-handed alpha
Helix 121	AN4	D	875	880	Right-handed alpha
Helix 122	AN5	D	897	903	Right-handed alpha
Helix 123	AN6	D	913	933	Right-handed alpha
Helix 124	AN7	D	934	935	Right-handed 310
Helix 125	AN8	D	997	1002	Right-handed 310
Helix 126	AN9	D	1003	1016	Right-handed alpha
Helix 127	AO1	D	1017	1019	Right-handed 310
Helix 128	AO2	D	1020	1026	Right-handed alpha
Helix 129	AO3	D	1029	1039	Right-handed alpha
Helix 130	AO4	E	18	22	Right-handed alpha
Helix 131	AO5	E	27	38	Right-handed alpha
Helix 132	AO6	E	46	74	Right-handed alpha
Helix 133	AO7	E	80	90	Right-handed alpha
Helix 134	AO8	E	91	101	Right-handed alpha
Helix 135	AO9	F	35	47	Right-handed alpha
Helix 136	AP1	F	53	78	Right-handed alpha
Helix 137	AP2	F	88	100	Right-handed alpha
Helix 138	AP3	F	101	120	Right-handed alpha

There are 4 sheets in PDB entry 6N1Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	882	884	first strand
Strand 2	A	910	912	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	78	79	first strand
Strand 2	C	51	52	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	882	884	first strand
Strand 2	D	910	912	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	78	79	first strand
Strand 2	F	51	52	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6N1Z

Analysis of interatomic Contacts of Structural Units in PDB entry:
6N1Z