Analysis of interatomic Contacts of Structural Units in PDB entry:
6N2A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6N2A entry

There are 2 chains in PDB entry 6N2A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 15LEU 436
B
 PHE 15LEU 436
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 38 helices in PDB entry 6N2A. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
34 41Right-handed alpha
Helix 2
AA2
A
51 65Right-handed alpha
Helix 3
AA3
A
77 79Right-handed 310
Helix 4
AA4
A
81 91Right-handed alpha
Helix 5
AA5
A
99 109Right-handed alpha
Helix 6
AA6
A
112 114Right-handed 310
Helix 7
AA7
A
124 135Right-handed alpha
Helix 8
AA8
A
142 157Right-handed alpha
Helix 9
AA9
A
175 185Right-handed alpha
Helix 10
AB1
A
193 204Right-handed alpha
Helix 11
AB2
A
224 244Right-handed alpha
Helix 12
AB3
A
270 277Right-handed alpha
Helix 13
AB4
A
278 286Right-handed alpha
Helix 14
AB5
A
294 299Right-handed alpha
Helix 15
AB6
A
330 336Right-handed alpha
Helix 16
AB7
A
393 397Right-handed 310
Helix 17
AB8
A
399 403Right-handed 310
Helix 18
AB9
A
425 431Right-handed alpha
Helix 19
AC1
A
432 434Right-handed 310
Helix 20
AC2
B
34 40Right-handed alpha
Helix 21
AC3
B
51 65Right-handed alpha
Helix 22
AC4
B
77 79Right-handed 310
Helix 23
AC5
B
81 91Right-handed alpha
Helix 24
AC6
B
99 109Right-handed alpha
Helix 25
AC7
B
112 114Right-handed 310
Helix 26
AC8
B
124 135Right-handed alpha
Helix 27
AC9
B
142 157Right-handed alpha
Helix 28
AD1
B
190 192Right-handed 310
Helix 29
AD2
B
193 203Right-handed alpha
Helix 30
AD3
B
224 244Right-handed alpha
Helix 31
AD4
B
270 277Right-handed alpha
Helix 32
AD5
B
278 285Right-handed alpha
Helix 33
AD6
B
294 299Right-handed alpha
Helix 34
AD7
B
330 336Right-handed alpha
Helix 35
AD8
B
393 397Right-handed 310
Helix 36
AD9
B
399 403Right-handed 310
Helix 37
AE1
B
425 431Right-handed alpha
Helix 38
AE2
B
432 434Right-handed 310
Back to top of page

There are 8 sheets in PDB entry 6N2A. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 21first strand
Strand 2
A
27 29anti-parallel
Strand 3
A
32 33anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
341 343first strand
Strand 2
A
383 386anti-parallel
Strand 3
A
302 313anti-parallel
Strand 4
A
318 322anti-parallel
Strand 5
A
353 359parallel
Strand 6
A
368 376anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
341 343first strand
Strand 2
A
383 386anti-parallel
Strand 3
A
302 313anti-parallel
Strand 4
A
46 50anti-parallel
Strand 5
A
408 411parallel
Strand 6
A
417 421anti-parallel
Back to list of sheets
Back to top of page

There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
189 190first strand
Strand 2
A
160 167parallel
Strand 3
A
208 214parallel
Strand 4
A
250 252parallel
Strand 5
A
288 291parallel
Strand 6
A
70 75parallel
Strand 7
A
94 97parallel
Strand 8
A
116 118parallel
Strand 9
A
137 140parallel
Strand 10
A
160 167parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
19 21first strand
Strand 2
B
27 29anti-parallel
Strand 3
B
32 33anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
341 343first strand
Strand 2
B
383 386anti-parallel
Strand 3
B
302 314anti-parallel
Strand 4
B
317 322anti-parallel
Strand 5
B
353 359parallel
Strand 6
B
368 376anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
341 343first strand
Strand 2
B
383 386anti-parallel
Strand 3
B
302 314anti-parallel
Strand 4
B
46 50anti-parallel
Strand 5
B
408 411parallel
Strand 6
B
417 421anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
70 75first strand
Strand 2
B
94 97parallel
Strand 3
B
116 118parallel
Strand 4
B
137 140parallel
Strand 5
B
160 165parallel
Strand 6
B
208 214parallel
Strand 7
B
250 252parallel
Strand 8
B
288 291parallel
Strand 9
B
70 75parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il