Analysis of interatomic Contacts of Structural Units in PDB entry:
6N2F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6N2F entry

There are 2 chains in PDB entry 6N2F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 19LEU 440
B
 PHE 19LEU 440
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 6N2F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 45Right-handed alpha
Helix 2
AA2
A
55 69Right-handed alpha
Helix 3
AA3
A
85 95Right-handed alpha
Helix 4
AA4
A
103 113Right-handed alpha
Helix 5
AA5
A
116 118Right-handed 310
Helix 6
AA6
A
128 139Right-handed alpha
Helix 7
AA7
A
146 161Right-handed alpha
Helix 8
AA8
A
197 207Right-handed alpha
Helix 9
AA9
A
227 248Right-handed alpha
Helix 10
AB1
A
274 281Right-handed alpha
Helix 11
AB2
A
282 290Right-handed alpha
Helix 12
AB3
A
297 303Right-handed alpha
Helix 13
AB4
A
334 340Right-handed alpha
Helix 14
AB5
A
397 401Right-handed 310
Helix 15
AB6
A
403 407Right-handed 310
Helix 16
AB7
A
429 435Right-handed alpha
Helix 17
AB8
A
436 438Right-handed 310
Helix 18
AB9
B
38 44Right-handed alpha
Helix 19
AC1
B
55 69Right-handed alpha
Helix 20
AC2
B
81 83Right-handed 310
Helix 21
AC3
B
85 95Right-handed alpha
Helix 22
AC4
B
103 113Right-handed alpha
Helix 23
AC5
B
116 118Right-handed 310
Helix 24
AC6
B
128 139Right-handed alpha
Helix 25
AC7
B
146 161Right-handed alpha
Helix 26
AC8
B
179 183Right-handed 310
Helix 27
AC9
B
197 207Right-handed alpha
Helix 28
AD1
B
228 248Right-handed alpha
Helix 29
AD2
B
274 280Right-handed alpha
Helix 30
AD3
B
282 289Right-handed alpha
Helix 31
AD4
B
298 303Right-handed alpha
Helix 32
AD5
B
334 340Right-handed alpha
Helix 33
AD6
B
397 401Right-handed 310
Helix 34
AD7
B
403 407Right-handed 310
Helix 35
AD8
B
430 435Right-handed alpha
Helix 36
AD9
B
436 438Right-handed 310
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There are 8 sheets in PDB entry 6N2F. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 25first strand
Strand 2
A
31 33anti-parallel
Strand 3
A
36 37anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
345 347first strand
Strand 2
A
387 390anti-parallel
Strand 3
A
306 318anti-parallel
Strand 4
A
321 326anti-parallel
Strand 5
A
357 363parallel
Strand 6
A
372 380anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
345 347first strand
Strand 2
A
387 390anti-parallel
Strand 3
A
306 318anti-parallel
Strand 4
A
50 54anti-parallel
Strand 5
A
412 415parallel
Strand 6
A
421 425anti-parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 79first strand
Strand 2
A
98 101parallel
Strand 3
A
120 122parallel
Strand 4
A
141 144parallel
Strand 5
A
164 169parallel
Strand 6
A
212 225parallel
Strand 7
A
254 261parallel
Strand 8
A
292 296parallel
Strand 9
A
74 79parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
23 25first strand
Strand 2
B
31 33anti-parallel
Strand 3
B
36 37anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
345 347first strand
Strand 2
B
387 390anti-parallel
Strand 3
B
306 318anti-parallel
Strand 4
B
321 326anti-parallel
Strand 5
B
358 363parallel
Strand 6
B
372 379anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
345 347first strand
Strand 2
B
387 390anti-parallel
Strand 3
B
306 318anti-parallel
Strand 4
B
50 54anti-parallel
Strand 5
B
412 415parallel
Strand 6
B
421 425anti-parallel
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There are 9 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
74 79first strand
Strand 2
B
98 101parallel
Strand 3
B
120 122parallel
Strand 4
B
141 144parallel
Strand 5
B
164 169parallel
Strand 6
B
212 218parallel
Strand 7
B
254 258parallel
Strand 8
B
292 295parallel
Strand 9
B
74 79parallel
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