Analysis of interatomic Contacts of Structural Units in PDB entry:
6N2N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6N2N entry

There are 4 chains in PDB entry 6N2N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 2GLN 573
B
 THR 2PRO 292
C
 GLU 2GLN 573
D
 THR 2PRO 292
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 77 helices in PDB entry 6N2N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 32Right-handed alpha
Helix 2
AA2
A
76 84Right-handed alpha
Helix 3
AA3
A
85 87Right-handed 310
Helix 4
AA4
A
117 125Right-handed alpha
Helix 5
AA5
A
127 129Right-handed 310
Helix 6
AA6
A
130 144Right-handed alpha
Helix 7
AA7
A
146 159Right-handed alpha
Helix 8
AA8
A
162 182Right-handed alpha
Helix 9
AA9
A
205 216Right-handed alpha
Helix 10
AB1
A
229 240Right-handed alpha
Helix 11
AB2
A
241 244Right-handed 310
Helix 12
AB3
A
252 266Right-handed alpha
Helix 13
AB4
A
275 282Right-handed alpha
Helix 14
AB5
A
282 293Right-handed alpha
Helix 15
AB6
A
318 325Right-handed alpha
Helix 16
AB7
A
339 358Right-handed alpha
Helix 17
AB8
A
367 372Right-handed alpha
Helix 18
AB9
A
380 384Right-handed 310
Helix 19
AC1
A
437 454Right-handed alpha
Helix 20
AC2
A
455 458Right-handed 310
Helix 21
AC3
A
480 495Right-handed alpha
Helix 22
AC4
A
511 520Right-handed alpha
Helix 23
AC5
A
534 544Right-handed alpha
Helix 24
AC6
A
560 572Right-handed alpha
Helix 25
AC7
B
13 18Right-handed 310
Helix 26
AC8
B
30 45Right-handed alpha
Helix 27
AC9
B
48 50Right-handed 310
Helix 28
AD1
B
60 68Right-handed 310
Helix 29
AD2
B
79 91Right-handed alpha
Helix 30
AD3
B
102 107Right-handed alpha
Helix 31
AD4
B
112 119Right-handed alpha
Helix 32
AD5
B
163 172Right-handed alpha
Helix 33
AD6
B
183 197Right-handed alpha
Helix 34
AD7
B
217 224Right-handed alpha
Helix 35
AD8
B
236 245Right-handed alpha
Helix 36
AD9
B
246 250Right-handed 310
Helix 37
AE1
B
263 275Right-handed alpha
Helix 38
AE2
B
282 289Right-handed alpha
Helix 39
AE3
C
17 32Right-handed alpha
Helix 40
AE4
C
76 83Right-handed alpha
Helix 41
AE5
C
84 87Right-handed 310
Helix 42
AE6
C
117 125Right-handed alpha
Helix 43
AE7
C
127 129Right-handed 310
Helix 44
AE8
C
130 144Right-handed alpha
Helix 45
AE9
C
146 159Right-handed alpha
Helix 46
AF1
C
162 182Right-handed alpha
Helix 47
AF2
C
205 216Right-handed alpha
Helix 48
AF3
C
229 240Right-handed alpha
Helix 49
AF4
C
241 244Right-handed 310
Helix 50
AF5
C
252 266Right-handed alpha
Helix 51
AF6
C
275 282Right-handed alpha
Helix 52
AF7
C
282 293Right-handed alpha
Helix 53
AF8
C
318 325Right-handed alpha
Helix 54
AF9
C
339 358Right-handed alpha
Helix 55
AG1
C
367 372Right-handed alpha
Helix 56
AG2
C
380 384Right-handed 310
Helix 57
AG3
C
437 454Right-handed alpha
Helix 58
AG4
C
455 458Right-handed 310
Helix 59
AG5
C
480 495Right-handed alpha
Helix 60
AG6
C
511 521Right-handed alpha
Helix 61
AG7
C
534 544Right-handed alpha
Helix 62
AG8
C
560 573Right-handed alpha
Helix 63
AG9
D
13 18Right-handed 310
Helix 64
AH1
D
30 45Right-handed alpha
Helix 65
AH2
D
48 50Right-handed 310
Helix 66
AH3
D
60 68Right-handed 310
Helix 67
AH4
D
79 91Right-handed alpha
Helix 68
AH5
D
102 107Right-handed alpha
Helix 69
AH6
D
108 111Right-handed 310
Helix 70
AH7
D
112 119Right-handed alpha
Helix 71
AH8
D
163 172Right-handed alpha
Helix 72
AH9
D
183 197Right-handed alpha
Helix 73
AI1
D
217 224Right-handed alpha
Helix 74
AI2
D
236 245Right-handed alpha
Helix 75
AI3
D
246 250Right-handed 310
Helix 76
AI4
D
263 275Right-handed alpha
Helix 77
AI5
D
282 289Right-handed alpha
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There are 10 sheets in PDB entry 6N2N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 41first strand
Strand 2
A
50 58anti-parallel
Strand 3
A
5 13anti-parallel
Strand 4
A
71 74parallel
Strand 5
A
92 96parallel
Strand 6
A
112 116parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
200 204first strand
Strand 2
A
373 377anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
246 249first strand
Strand 2
A
220 223parallel
Strand 3
A
270 274parallel
Strand 4
A
296 302parallel
Strand 5
A
360 366parallel
Strand 6
A
333 336parallel
Strand 7
A
506 508anti-parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
422 424first strand
Strand 2
D
71 74parallel
Strand 3
D
52 56parallel
Strand 4
D
95 101parallel
Strand 5
D
123 129parallel
Strand 6
D
200 206parallel
Strand 7
D
175 180parallel
Strand 8
D
251 258anti-parallel
Strand 9
D
225 227parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
462 466first strand
Strand 2
A
499 504anti-parallel
Strand 3
A
471 476parallel
Strand 4
A
522 529parallel
Strand 5
A
549 552parallel
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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
225 227first strand
Strand 2
B
251 258parallel
Strand 3
B
175 180anti-parallel
Strand 4
B
200 206parallel
Strand 5
B
123 129parallel
Strand 6
B
95 101parallel
Strand 7
B
52 56parallel
Strand 8
B
71 74parallel
Strand 9
C
422 424parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
35 41first strand
Strand 2
C
50 58anti-parallel
Strand 3
C
5 13anti-parallel
Strand 4
C
71 74parallel
Strand 5
C
92 96parallel
Strand 6
C
112 116parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
200 204first strand
Strand 2
C
373 377anti-parallel
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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
246 249first strand
Strand 2
C
220 223parallel
Strand 3
C
270 274parallel
Strand 4
C
296 302parallel
Strand 5
C
360 366parallel
Strand 6
C
333 336parallel
Strand 7
C
506 508anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
462 466first strand
Strand 2
C
499 504anti-parallel
Strand 3
C
471 476parallel
Strand 4
C
522 530parallel
Strand 5
C
549 553parallel
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