Analysis of interatomic Contacts of Structural Units in PDB entry:
6N2W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6N2W entry

There are 2 chains in PDB entry 6N2W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER -15ILE 673
B
 PRO 4ILE 673
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 6N2W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
118 122Right-handed 310
Helix 2
AA2
A
124 142Right-handed alpha
Helix 3
AA3
A
159 163Right-handed 310
Helix 4
AA4
A
164 168Right-handed 310
Helix 5
AA5
A
216 224Right-handed alpha
Helix 6
AA6
A
228 239Right-handed alpha
Helix 7
AA7
A
271 278Right-handed alpha
Helix 8
AA8
A
287 290Right-handed 310
Helix 9
AA9
A
343 365Right-handed alpha
Helix 10
AB1
A
371 386Right-handed alpha
Helix 11
AB2
A
390 397Right-handed alpha
Helix 12
AB3
A
402 415Right-handed alpha
Helix 13
AB4
A
431 443Right-handed alpha
Helix 14
AB5
A
445 448Right-handed 310
Helix 15
AB6
A
449 457Right-handed alpha
Helix 16
AB7
A
468 493Right-handed alpha
Helix 17
AB8
A
495 502Right-handed alpha
Helix 18
AB9
A
502 515Right-handed alpha
Helix 19
AC1
A
520 524Right-handed 310
Helix 20
AC2
A
531 547Right-handed alpha
Helix 21
AC3
A
547 555Right-handed alpha
Helix 22
AC4
A
556 562Right-handed alpha
Helix 23
AC5
A
563 567Right-handed 310
Helix 24
AC6
A
583 589Right-handed alpha
Helix 25
AC7
A
593 607Right-handed alpha
Helix 26
AC8
A
627 652Right-handed alpha
Helix 27
AC9
A
653 655Right-handed 310
Helix 28
AD1
A
663 667Right-handed 310
Helix 29
AD2
B
118 122Right-handed 310
Helix 30
AD3
B
124 142Right-handed alpha
Helix 31
AD4
B
159 163Right-handed 310
Helix 32
AD5
B
216 226Right-handed alpha
Helix 33
AD6
B
228 239Right-handed alpha
Helix 34
AD7
B
258 263Right-handed alpha
Helix 35
AD8
B
264 266Right-handed 310
Helix 36
AD9
B
271 278Right-handed alpha
Helix 37
AE1
B
287 290Right-handed 310
Helix 38
AE2
B
343 365Right-handed alpha
Helix 39
AE3
B
371 386Right-handed alpha
Helix 40
AE4
B
390 397Right-handed alpha
Helix 41
AE5
B
402 415Right-handed alpha
Helix 42
AE6
B
431 440Right-handed alpha
Helix 43
AE7
B
444 449Right-handed alpha
Helix 44
AE8
B
449 457Right-handed alpha
Helix 45
AE9
B
468 493Right-handed alpha
Helix 46
AF1
B
495 502Right-handed alpha
Helix 47
AF2
B
502 515Right-handed alpha
Helix 48
AF3
B
520 524Right-handed 310
Helix 49
AF4
B
531 547Right-handed alpha
Helix 50
AF5
B
547 554Right-handed alpha
Helix 51
AF6
B
556 562Right-handed alpha
Helix 52
AF7
B
563 567Right-handed 310
Helix 53
AF8
B
583 591Right-handed alpha
Helix 54
AF9
B
593 608Right-handed alpha
Helix 55
AG1
B
627 652Right-handed alpha
Helix 56
AG2
B
663 667Right-handed 310
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There are 9 sheets in PDB entry 6N2W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
-14 -12first strand
Strand 2
A
50 55parallel
Strand 3
A
6 12anti-parallel
Strand 4
A
80 88anti-parallel
Strand 5
A
94 103anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 39first strand
Strand 2
A
23 30anti-parallel
Strand 3
A
64 72anti-parallel
Strand 4
A
109 111anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 145first strand
Strand 2
A
154 155anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
246 247first strand
Strand 2
A
281 285anti-parallel
Strand 3
A
309 314anti-parallel
Strand 4
A
320 326anti-parallel
Strand 5
A
337 338anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
50 55first strand
Strand 2
B
6 12anti-parallel
Strand 3
B
80 88anti-parallel
Strand 4
B
94 103anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 34first strand
Strand 2
B
23 30anti-parallel
Strand 3
B
38 40anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
33 34first strand
Strand 2
B
23 30anti-parallel
Strand 3
B
64 72anti-parallel
Strand 4
B
109 112anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
144 145first strand
Strand 2
B
154 155anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
246 247first strand
Strand 2
B
281 285anti-parallel
Strand 3
B
309 314anti-parallel
Strand 4
B
320 326anti-parallel
Strand 5
B
337 338anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il