Analysis of interatomic Contacts of Structural Units in PDB entry:
6N3L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6N3L entry

There are 2 chains in PDB entry 6N3L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 584PRO 1002
B
 SER 584PRO 1002
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 6N3L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
584 589Right-handed alpha
Helix 2
AA2
A
627 641Right-handed alpha
Helix 3
AA3
A
809 816Right-handed alpha
Helix 4
AA4
A
817 820Right-handed 310
Helix 5
AA5
A
821 842Right-handed alpha
Helix 6
AA6
A
850 852Right-handed 310
Helix 7
AA7
A
904 908Right-handed 310
Helix 8
AA8
A
923 938Right-handed alpha
Helix 9
AA9
A
943 953Right-handed alpha
Helix 10
AB1
A
972 982Right-handed alpha
Helix 11
AB2
A
985 989Right-handed 310
Helix 12
AB3
A
991 998Right-handed alpha
Helix 13
AB4
B
585 589Right-handed alpha
Helix 14
AB5
B
627 641Right-handed alpha
Helix 15
AB6
B
809 816Right-handed alpha
Helix 16
AB7
B
817 820Right-handed 310
Helix 17
AB8
B
821 842Right-handed alpha
Helix 18
AB9
B
850 852Right-handed 310
Helix 19
AC1
B
904 908Right-handed 310
Helix 20
AC2
B
923 938Right-handed alpha
Helix 21
AC3
B
943 953Right-handed alpha
Helix 22
AC4
B
972 982Right-handed alpha
Helix 23
AC5
B
985 989Right-handed 310
Helix 24
AC6
B
991 998Right-handed alpha
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There are 4 sheets in PDB entry 6N3L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
590 599first strand
Strand 2
A
602 609anti-parallel
Strand 3
A
615 622anti-parallel
Strand 4
A
797 803anti-parallel
Strand 5
A
651 657anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
854 856first strand
Strand 2
A
862 864anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
590 598first strand
Strand 2
B
603 609anti-parallel
Strand 3
B
615 622anti-parallel
Strand 4
B
797 803anti-parallel
Strand 5
B
651 656anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
854 856first strand
Strand 2
B
862 864anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il