Analysis of interatomic Contacts of Structural Units in PDB entry:
6N3S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6N3S entry

There are 2 chains in PDB entry 6N3S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1GLY 215
B
 ALA 1GLY 215
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 6N3S. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 11Right-handed 310
Helix 2
AA2
A
24 41Right-handed alpha
Helix 3
AA3
A
49 57Right-handed alpha
Helix 4
AA4
A
61 65Right-handed 310
Helix 5
AA5
A
67 79Right-handed alpha
Helix 6
AA6
A
121 133Right-handed alpha
Helix 7
AA7
A
201 205Right-handed 310
Helix 8
AA8
B
8 11Right-handed 310
Helix 9
AA9
B
24 41Right-handed alpha
Helix 10
AB1
B
49 57Right-handed alpha
Helix 11
AB2
B
61 65Right-handed 310
Helix 12
AB3
B
67 79Right-handed alpha
Helix 13
AB4
B
121 133Right-handed alpha
Helix 14
AB5
B
201 205Right-handed 310
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There are 6 sheets in PDB entry 6N3S. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 6first strand
Strand 2
A
162 170anti-parallel
Strand 3
A
135 139anti-parallel
Strand 4
A
209 213anti-parallel
Strand 5
A
114 117anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 6first strand
Strand 2
A
162 170anti-parallel
Strand 3
A
177 181anti-parallel
Strand 4
A
193 197anti-parallel
Strand 5
A
151 152parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
82 84first strand
Strand 2
A
108 111anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 6first strand
Strand 2
B
162 170anti-parallel
Strand 3
B
135 139anti-parallel
Strand 4
B
209 213anti-parallel
Strand 5
B
114 117anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 6first strand
Strand 2
B
162 170anti-parallel
Strand 3
B
177 181anti-parallel
Strand 4
B
193 197anti-parallel
Strand 5
B
151 152parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
82 84first strand
Strand 2
B
108 111anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il