Analysis of interatomic Contacts of Structural Units in PDB entry:
6N4I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6N4I entry

There are 8 chains in PDB entry 6N4I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 720ALA 944
B
 SER 720ALA 944
C
 SER 720MET 945
D
 SER 720ALA 944
E
 TYR 1TRP 30
F
 TYR 1TRP 30
G
 TYR 1TRP 30
H
 TYR 1TRP 30
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 53 helices in PDB entry 6N4I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
720 732Right-handed alpha
Helix 2
AA2
A
732 752Right-handed alpha
Helix 3
AA3
A
759 787Right-handed alpha
Helix 4
AA4
A
789 794Right-handed alpha
Helix 5
AA5
A
794 813Right-handed alpha
Helix 6
AA6
A
820 829Right-handed alpha
Helix 7
AA7
A
831 836Right-handed alpha
Helix 8
AA8
A
837 851Right-handed alpha
Helix 9
AA9
A
851 876Right-handed alpha
Helix 10
AB1
A
880 885Right-handed alpha
Helix 11
AB2
A
886 899Right-handed alpha
Helix 12
AB3
A
907 915Right-handed alpha
Helix 13
AB4
A
918 944Right-handed alpha
Helix 14
AB5
B
721 732Right-handed alpha
Helix 15
AB6
B
732 752Right-handed alpha
Helix 16
AB7
B
760 787Right-handed alpha
Helix 17
AB8
B
788 794Right-handed alpha
Helix 18
AB9
B
794 813Right-handed alpha
Helix 19
AC1
B
820 829Right-handed alpha
Helix 20
AC2
B
831 836Right-handed alpha
Helix 21
AC3
B
837 851Right-handed alpha
Helix 22
AC4
B
851 877Right-handed alpha
Helix 23
AC5
B
880 885Right-handed alpha
Helix 24
AC6
B
886 899Right-handed alpha
Helix 25
AC7
B
907 915Right-handed alpha
Helix 26
AC8
B
918 944Right-handed alpha
Helix 27
AC9
C
721 732Right-handed alpha
Helix 28
AD1
C
732 752Right-handed alpha
Helix 29
AD2
C
759 787Right-handed alpha
Helix 30
AD3
C
788 794Right-handed alpha
Helix 31
AD4
C
794 813Right-handed alpha
Helix 32
AD5
C
820 829Right-handed alpha
Helix 33
AD6
C
831 836Right-handed alpha
Helix 34
AD7
C
837 851Right-handed alpha
Helix 35
AD8
C
851 876Right-handed alpha
Helix 36
AD9
C
880 885Right-handed alpha
Helix 37
AE1
C
886 899Right-handed alpha
Helix 38
AE2
C
907 915Right-handed alpha
Helix 39
AE3
C
918 945Right-handed alpha
Helix 40
AE4
D
721 732Right-handed alpha
Helix 41
AE5
D
732 752Right-handed alpha
Helix 42
AE6
D
760 788Right-handed alpha
Helix 43
AE7
D
788 794Right-handed alpha
Helix 44
AE8
D
794 813Right-handed alpha
Helix 45
AE9
D
820 829Right-handed alpha
Helix 46
AF1
D
831 836Right-handed alpha
Helix 47
AF2
D
837 851Right-handed alpha
Helix 48
AF3
D
854 876Right-handed alpha
Helix 49
AF4
D
880 885Right-handed alpha
Helix 50
AF5
D
886 899Right-handed alpha
Helix 51
AF6
D
907 913Right-handed alpha
Helix 52
AF7
D
915 917Right-handed 310
Helix 53
AF8
D
918 944Right-handed alpha
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There are 4 sheets in PDB entry 6N4I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
19 21first strand
Strand 2
E
25 27anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
19 21first strand
Strand 2
F
25 27anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
19 21first strand
Strand 2
G
25 27anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
19 21first strand
Strand 2
H
25 27anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il