Analysis of interatomic Contacts of Structural Units in PDB entry:
6N56


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6N56 entry

There is 1 chain in PDB entry 6N56 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASN 707
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 6N56. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 27Right-handed alpha
Helix 2
AA2
A
65 77Right-handed alpha
Helix 3
AA3
A
82 103Right-handed alpha
Helix 4
AA4
A
160 171Right-handed alpha
Helix 5
AA5
A
219 223Right-handed 310
Helix 6
AA6
A
234 243Right-handed alpha
Helix 7
AA7
A
287 292Right-handed alpha
Helix 8
AA8
A
295 299Right-handed 310
Helix 9
AA9
A
300 314Right-handed alpha
Helix 10
AB1
A
330 333Right-handed 310
Helix 11
AB2
A
334 342Right-handed alpha
Helix 12
AB3
A
342 353Right-handed alpha
Helix 13
AB4
A
365 369Right-handed 310
Helix 14
AB5
A
375 379Right-handed 310
Helix 15
AB6
A
432 436Right-handed 310
Helix 16
AB7
A
438 457Right-handed alpha
Helix 17
AB8
A
463 483Right-handed alpha
Helix 18
AB9
A
489 505Right-handed alpha
Helix 19
AC1
A
510 529Right-handed alpha
Helix 20
AC2
A
541 567Right-handed alpha
Helix 21
AC3
A
611 615Right-handed 310
Helix 22
AC4
A
635 653Right-handed alpha
Helix 23
AC5
A
656 665Right-handed alpha
Helix 24
AC6
A
670 675Right-handed alpha
Helix 25
AC7
A
681 688Right-handed alpha
Helix 26
AC8
A
692 697Right-handed alpha
Helix 27
AC9
A
698 707Right-handed alpha
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There are 6 sheets in PDB entry 6N56. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
174 176first strand
Strand 2
A
31 34parallel
Strand 3
A
3 11parallel
Strand 4
A
204 214parallel
Strand 5
A
190 198anti-parallel
Strand 6
A
179 187anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
174 176first strand
Strand 2
A
31 34parallel
Strand 3
A
3 11parallel
Strand 4
A
204 214parallel
Strand 5
A
415 417parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
422 423first strand
Strand 2
A
401 403parallel
Strand 3
A
248 249anti-parallel
Strand 4
A
589 594anti-parallel
Strand 5
A
604 609anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
254 261first strand
Strand 2
A
389 398anti-parallel
Strand 3
A
326 329anti-parallel
Strand 4
A
278 280anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
362 364first strand
Strand 2
A
384 385anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
582 583first strand
Strand 2
A
630 631parallel
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