Analysis of interatomic Contacts of Structural Units in PDB entry:
6N5Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6N5Z entry

There are 2 chains in PDB entry 6N5Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 28VAL 189
B
 PRO 29PRO 190
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 6N5Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
68 81Right-handed alpha
Helix 2
AA2
A
82 86Right-handed 310
Helix 3
AA3
A
99 111Right-handed alpha
Helix 4
AA4
A
112 116Right-handed 310
Helix 5
AA5
A
117 153Right-handed alpha
Helix 6
AA6
A
155 158Right-handed 310
Helix 7
AA7
A
159 168Right-handed alpha
Helix 8
AA8
B
69 81Right-handed alpha
Helix 9
AA9
B
82 86Right-handed 310
Helix 10
AB1
B
99 112Right-handed alpha
Helix 11
AB2
B
113 116Right-handed 310
Helix 12
AB3
B
117 153Right-handed alpha
Helix 13
AB4
B
155 158Right-handed 310
Helix 14
AB5
B
159 168Right-handed alpha
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There are 3 sheets in PDB entry 6N5Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 67first strand
Strand 2
A
44 53anti-parallel
Strand 3
A
31 41anti-parallel
Strand 4
B
178 182anti-parallel
Strand 5
B
185 189anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 188first strand
Strand 2
A
178 182anti-parallel
Strand 3
B
37 41anti-parallel
Strand 4
B
44 53anti-parallel
Strand 5
B
31 34anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 188first strand
Strand 2
A
178 182anti-parallel
Strand 3
B
37 41anti-parallel
Strand 4
B
44 53anti-parallel
Strand 5
B
62 68anti-parallel
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