Analysis of interatomic Contacts of Structural Units in PDB entry:
6N64

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6N64 entry

There are 8 chains in PDB entry 6N64 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 1715	MSE 1884
B	THR 1712	MSE 1884
C	LEU 1710	MSE 1884
D	LEU 1710	MSE 1884
E	PRO 1714	LYS 1886
F	LEU 1713	MSE 1884
G	UNK 273	UNK 284
H	UNK 273	UNK 293

There are 58 helices in PDB entry 6N64. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	1719	1729	Right-handed alpha
Helix 2	AA2	A	1735	1750	Right-handed alpha
Helix 3	AA3	A	1757	1768	Right-handed alpha
Helix 4	AA4	A	1778	1780	Right-handed 310
Helix 5	AA5	A	1812	1815	Right-handed 310
Helix 6	AA6	A	1818	1822	Right-handed 310
Helix 7	AA7	A	1823	1833	Right-handed alpha
Helix 8	AA8	A	1840	1852	Right-handed alpha
Helix 9	AA9	A	1876	1880	Right-handed 310
Helix 10	AB1	B	1719	1729	Right-handed alpha
Helix 11	AB2	B	1735	1750	Right-handed alpha
Helix 12	AB3	B	1757	1768	Right-handed alpha
Helix 13	AB4	B	1778	1780	Right-handed 310
Helix 14	AB5	B	1812	1815	Right-handed 310
Helix 15	AB6	B	1818	1822	Right-handed 310
Helix 16	AB7	B	1824	1833	Right-handed alpha
Helix 17	AB8	B	1840	1852	Right-handed alpha
Helix 18	AB9	B	1876	1880	Right-handed 310
Helix 19	AC1	C	1719	1729	Right-handed alpha
Helix 20	AC2	C	1735	1750	Right-handed alpha
Helix 21	AC3	C	1757	1768	Right-handed alpha
Helix 22	AC4	C	1778	1780	Right-handed 310
Helix 23	AC5	C	1786	1790	Right-handed 310
Helix 24	AC6	C	1812	1815	Right-handed 310
Helix 25	AC7	C	1818	1822	Right-handed 310
Helix 26	AC8	C	1824	1833	Right-handed alpha
Helix 27	AC9	C	1840	1852	Right-handed alpha
Helix 28	AD1	C	1876	1880	Right-handed 310
Helix 29	AD2	D	1719	1729	Right-handed alpha
Helix 30	AD3	D	1735	1750	Right-handed alpha
Helix 31	AD4	D	1757	1768	Right-handed alpha
Helix 32	AD5	D	1778	1780	Right-handed 310
Helix 33	AD6	D	1812	1815	Right-handed 310
Helix 34	AD7	D	1818	1822	Right-handed 310
Helix 35	AD8	D	1823	1833	Right-handed alpha
Helix 36	AD9	D	1840	1852	Right-handed alpha
Helix 37	AE1	D	1876	1880	Right-handed 310
Helix 38	AE2	E	1719	1729	Right-handed alpha
Helix 39	AE3	E	1735	1750	Right-handed alpha
Helix 40	AE4	E	1757	1768	Right-handed alpha
Helix 41	AE5	E	1778	1780	Right-handed 310
Helix 42	AE6	E	1811	1815	Right-handed 310
Helix 43	AE7	E	1818	1822	Right-handed 310
Helix 44	AE8	E	1823	1833	Right-handed alpha
Helix 45	AE9	E	1840	1852	Right-handed alpha
Helix 46	AF1	E	1876	1880	Right-handed 310
Helix 47	AF2	F	1719	1729	Right-handed alpha
Helix 48	AF3	F	1735	1750	Right-handed alpha
Helix 49	AF4	F	1757	1768	Right-handed alpha
Helix 50	AF5	F	1778	1780	Right-handed 310
Helix 51	AF6	F	1792	1796	Right-handed 310
Helix 52	AF7	F	1812	1815	Right-handed 310
Helix 53	AF8	F	1818	1820	Right-handed 310
Helix 54	AF9	F	1821	1833	Right-handed alpha
Helix 55	AG1	F	1840	1852	Right-handed alpha
Helix 56	AG2	F	1876	1880	Right-handed 310
Helix 57	AG3	G	275	284	Right-handed alpha
Helix 58	AG4	H	274	293	Right-handed alpha

There are 13 sheets in PDB entry 6N64. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1753	1755	first strand
Strand 2	A	1774	1776	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1809	1810	first strand
Strand 2	A	1836	1838	anti-parallel
Strand 3	A	1860	1862	parallel
Strand 4	A	1867	1868	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1753	1755	first strand
Strand 2	B	1774	1776	parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1809	1810	first strand
Strand 2	B	1836	1838	anti-parallel
Strand 3	B	1860	1862	parallel
Strand 4	B	1866	1868	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1753	1755	first strand
Strand 2	C	1774	1776	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1809	1810	first strand
Strand 2	C	1836	1838	anti-parallel
Strand 3	C	1860	1862	parallel
Strand 4	C	1866	1868	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1753	1755	first strand
Strand 2	D	1774	1776	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1809	1810	first strand
Strand 2	D	1836	1838	anti-parallel
Strand 3	D	1860	1862	parallel
Strand 4	D	1867	1868	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1753	1755	first strand
Strand 2	E	1774	1776	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1795	1796	first strand
Strand 2	E	1799	1800	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1836	1838	first strand
Strand 2	E	1860	1862	parallel
Strand 3	E	1867	1868	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	1753	1755	first strand
Strand 2	F	1774	1776	parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	1809	1810	first strand
Strand 2	F	1836	1838	anti-parallel
Strand 3	F	1860	1862	parallel
Strand 4	F	1867	1868	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6N64

Analysis of interatomic Contacts of Structural Units in PDB entry:
6N64