Analysis of interatomic Contacts of Structural Units in PDB entry:
6N7E

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6N7E entry

There are 3 chains in PDB entry 6N7E (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 431	HIS 823
B	GLU 430	HIS 824
C	GLU 431	PRO 505

There are 51 helices in PDB entry 6N7E. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	431	441	Right-handed alpha
Helix 2	AA2	A	445	449	Right-handed 310
Helix 3	AA3	A	454	456	Right-handed 310
Helix 4	AA4	A	466	476	Right-handed alpha
Helix 5	AA5	A	498	501	Right-handed 310
Helix 6	AA6	A	511	519	Right-handed alpha
Helix 7	AA7	A	530	541	Right-handed alpha
Helix 8	AA8	A	569	578	Right-handed alpha
Helix 9	AA9	A	621	636	Right-handed alpha
Helix 10	AB1	A	637	640	Right-handed 310
Helix 11	AB2	A	645	654	Right-handed alpha
Helix 12	AB3	A	665	669	Right-handed 310
Helix 13	AB4	A	809	822	Right-handed alpha
Helix 14	AB5	B	431	440	Right-handed alpha
Helix 15	AB6	B	445	450	Right-handed alpha
Helix 16	AB7	B	454	456	Right-handed 310
Helix 17	AB8	B	466	477	Right-handed alpha
Helix 18	AB9	B	498	501	Right-handed 310
Helix 19	AC1	B	511	519	Right-handed alpha
Helix 20	AC2	B	530	541	Right-handed alpha
Helix 21	AC3	B	568	578	Right-handed alpha
Helix 22	AC4	B	621	635	Right-handed alpha
Helix 23	AC5	B	636	640	Right-handed 310
Helix 24	AC6	B	645	655	Right-handed alpha
Helix 25	AC7	B	665	669	Right-handed 310
Helix 26	AC8	B	671	673	Right-handed 310
Helix 27	AC9	B	809	821	Right-handed alpha
Helix 28	AD1	C	432	440	Right-handed alpha
Helix 29	AD2	C	445	449	Right-handed 310
Helix 30	AD3	C	452	456	Right-handed 310
Helix 31	AD4	C	466	477	Right-handed alpha
Helix 32	AD5	C	498	501	Right-handed 310
Helix 33	AD6	C	511	519	Right-handed alpha
Helix 34	AD7	C	530	540	Right-handed alpha
Helix 35	AD8	C	569	578	Right-handed alpha
Helix 36	AD9	C	621	636	Right-handed alpha
Helix 37	AE1	C	637	640	Right-handed 310
Helix 38	AE2	C	645	654	Right-handed alpha
Helix 39	AE3	C	809	823	Right-handed alpha
Helix 40	AE4	D	432	442	Right-handed alpha
Helix 41	AE5	D	445	449	Right-handed 310
Helix 42	AE6	D	466	477	Right-handed alpha
Helix 43	AE7	D	498	501	Right-handed 310
Helix 44	AE8	D	511	519	Right-handed alpha
Helix 45	AE9	D	530	541	Right-handed alpha
Helix 46	AF1	D	568	578	Right-handed alpha
Helix 47	AF2	D	605	610	Right-handed 310
Helix 48	AF3	D	621	635	Right-handed alpha
Helix 49	AF4	D	645	655	Right-handed alpha
Helix 50	AF5	D	715	719	Right-handed 310
Helix 51	AF6	D	809	818	Right-handed alpha

There are 20 sheets in PDB entry 6N7E. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	451	452	first strand
Strand 2	A	565	568	anti-parallel
Strand 3	A	545	548	anti-parallel
Strand 4	A	524	525	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	459	460	first strand
Strand 2	A	480	484	parallel
Strand 3	A	491	496	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	464	465	first strand
Strand 2	A	509	510	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	659	662	first strand
Strand 2	A	802	808	anti-parallel
Strand 3	A	685	691	anti-parallel
Strand 4	A	712	713	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	675	677	first strand
Strand 2	A	794	798	anti-parallel
Strand 3	A	694	698	anti-parallel
Strand 4	A	703	707	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	451	452	first strand
Strand 2	B	565	567	anti-parallel
Strand 3	B	546	548	anti-parallel
Strand 4	B	523	525	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	459	460	first strand
Strand 2	B	480	484	parallel
Strand 3	B	491	496	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	464	465	first strand
Strand 2	B	509	510	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	659	662	first strand
Strand 2	B	802	808	anti-parallel
Strand 3	B	685	691	anti-parallel
Strand 4	B	712	713	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	675	677	first strand
Strand 2	B	794	798	anti-parallel
Strand 3	B	694	698	anti-parallel
Strand 4	B	703	707	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	459	460	first strand
Strand 2	C	480	484	parallel
Strand 3	C	491	496	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	464	465	first strand
Strand 2	C	509	510	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	545	546	first strand
Strand 2	C	567	568	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	659	662	first strand
Strand 2	C	802	808	anti-parallel
Strand 3	C	685	691	anti-parallel
Strand 4	C	712	713	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	675	677	first strand
Strand 2	C	794	798	anti-parallel
Strand 3	C	694	698	anti-parallel
Strand 4	C	703	707	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	451	452	first strand
Strand 2	D	565	567	anti-parallel
Strand 3	D	546	549	anti-parallel
Strand 4	D	524	526	parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	459	460	first strand
Strand 2	D	480	484	parallel
Strand 3	D	491	496	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	464	465	first strand
Strand 2	D	509	510	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	659	662	first strand
Strand 2	D	802	808	anti-parallel
Strand 3	D	685	691	anti-parallel
Strand 4	D	712	713	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	675	677	first strand
Strand 2	D	794	798	anti-parallel
Strand 3	D	694	698	anti-parallel
Strand 4	D	703	707	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6N7E

Analysis of interatomic Contacts of Structural Units in PDB entry:
6N7E