Analysis of interatomic Contacts of Structural Units in PDB entry:
6N7S

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6N7S entry

There are 7 chains in PDB entry 6N7S (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 264	GLY 549
B	GLY 264	GLY 549
C	ASP 263	TYR 547
D	ASP 263	GLY 549
E	ASP 263	SER 545
F	GLY 264	SER 545
T	T 6	T 18

There are 67 helices in PDB entry 6N7S. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	272	280	Right-handed alpha
Helix 2	AA2	A	292	298	Right-handed alpha
Helix 3	AA3	A	320	332	Right-handed alpha
Helix 4	AA4	A	345	348	Right-handed 310
Helix 5	AA5	A	349	358	Right-handed alpha
Helix 6	AA6	A	365	372	Right-handed alpha
Helix 7	AA7	A	377	382	Right-handed alpha
Helix 8	AA8	A	404	416	Right-handed alpha
Helix 9	AA9	A	425	430	Right-handed alpha
Helix 10	AB1	A	439	453	Right-handed alpha
Helix 11	AB2	A	474	478	Right-handed 310
Helix 12	AB3	B	271	279	Right-handed alpha
Helix 13	AB4	B	293	298	Right-handed alpha
Helix 14	AB5	B	319	329	Right-handed alpha
Helix 15	AB6	B	345	358	Right-handed alpha
Helix 16	AB7	B	377	382	Right-handed alpha
Helix 17	AB8	B	385	389	Right-handed 310
Helix 18	AB9	B	404	415	Right-handed alpha
Helix 19	AC1	B	425	430	Right-handed alpha
Helix 20	AC2	B	438	454	Right-handed alpha
Helix 21	AC3	B	482	486	Right-handed 310
Helix 22	AC4	C	272	277	Right-handed alpha
Helix 23	AC5	C	293	298	Right-handed alpha
Helix 24	AC6	C	324	329	Right-handed alpha
Helix 25	AC7	C	345	351	Right-handed alpha
Helix 26	AC8	C	353	358	Right-handed alpha
Helix 27	AC9	C	365	372	Right-handed alpha
Helix 28	AD1	C	376	386	Right-handed alpha
Helix 29	AD2	C	404	415	Right-handed alpha
Helix 30	AD3	C	425	429	Right-handed 310
Helix 31	AD4	C	445	457	Right-handed alpha
Helix 32	AD5	C	474	478	Right-handed 310
Helix 33	AD6	C	482	486	Right-handed 310
Helix 34	AD7	C	490	494	Right-handed 310
Helix 35	AD8	D	272	277	Right-handed alpha
Helix 36	AD9	D	294	299	Right-handed alpha
Helix 37	AE1	D	323	328	Right-handed alpha
Helix 38	AE2	D	347	358	Right-handed alpha
Helix 39	AE3	D	366	372	Right-handed alpha
Helix 40	AE4	D	376	384	Right-handed alpha
Helix 41	AE5	D	403	415	Right-handed alpha
Helix 42	AE6	D	442	457	Right-handed alpha
Helix 43	AE7	D	474	478	Right-handed 310
Helix 44	AE8	D	490	494	Right-handed 310
Helix 45	AE9	E	269	271	Right-handed 310
Helix 46	AF1	E	272	277	Right-handed alpha
Helix 47	AF2	E	324	332	Right-handed alpha
Helix 48	AF3	E	345	358	Right-handed alpha
Helix 49	AF4	E	361	365	Right-handed 310
Helix 50	AF5	E	367	372	Right-handed alpha
Helix 51	AF6	E	378	387	Right-handed alpha
Helix 52	AF7	E	406	415	Right-handed alpha
Helix 53	AF8	E	440	444	Right-handed alpha
Helix 54	AF9	E	445	457	Right-handed alpha
Helix 55	AG1	E	474	478	Right-handed 310
Helix 56	AG2	F	267	272	Right-handed 310
Helix 57	AG3	F	273	279	Right-handed alpha
Helix 58	AG4	F	317	323	Right-handed alpha
Helix 59	AG5	F	323	329	Right-handed alpha
Helix 60	AG6	F	345	350	Right-handed alpha
Helix 61	AG7	F	351	358	Right-handed alpha
Helix 62	AG8	F	366	373	Right-handed alpha
Helix 63	AG9	F	378	384	Right-handed alpha
Helix 64	AH1	F	405	410	Right-handed alpha
Helix 65	AH2	F	410	415	Right-handed alpha
Helix 66	AH3	F	445	457	Right-handed alpha
Helix 67	AH4	F	489	493	Right-handed 310

There are 11 sheets in PDB entry 6N7S. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	265	267	first strand
Strand 2	B	391	394	anti-parallel
Strand 3	B	337	340	parallel
Strand 4	B	420	423	parallel
Strand 5	B	459	463	parallel
Strand 6	B	306	311	parallel
Strand 7	B	498	502	parallel
Strand 8	B	513	521	anti-parallel
Strand 9	B	528	534	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	420	423	first strand
Strand 2	A	459	463	parallel
Strand 3	A	308	311	parallel
Strand 4	A	498	504	parallel
Strand 5	A	513	521	anti-parallel
Strand 6	A	533	535	anti-parallel
Strand 7	A	542	544	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	337	338	first strand
Strand 2	A	391	392	parallel

Back to list of sheets
Back to top of page

There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	391	394	first strand
Strand 2	C	337	340	parallel
Strand 3	C	420	423	parallel
Strand 4	C	459	463	parallel
Strand 5	C	307	311	parallel
Strand 6	C	498	503	parallel
Strand 7	C	513	518	anti-parallel
Strand 8	C	528	534	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	422	423	first strand
Strand 2	D	460	463	parallel
Strand 3	D	307	311	parallel
Strand 4	D	498	501	parallel
Strand 5	D	514	521	anti-parallel
Strand 6	D	503	504	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	422	423	first strand
Strand 2	D	460	463	parallel
Strand 3	D	307	311	parallel
Strand 4	D	498	501	parallel
Strand 5	D	514	521	anti-parallel
Strand 6	D	528	532	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	266	267	first strand
Strand 2	F	392	393	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	307	309	first strand
Strand 2	E	459	462	parallel
Strand 3	E	420	422	parallel
Strand 4	E	337	338	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	498	503	first strand
Strand 2	E	514	521	anti-parallel
Strand 3	E	529	533	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	308	311	first strand
Strand 2	F	498	504	parallel
Strand 3	F	514	518	anti-parallel
Strand 4	F	528	534	anti-parallel
Strand 5	F	543	545	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	336	340	first strand
Strand 2	F	418	423	parallel
Strand 3	F	459	462	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6N7S

Analysis of interatomic Contacts of Structural Units in PDB entry:
6N7S