Analysis of interatomic Contacts of Structural Units in PDB entry:
6N7X

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6N7X entry

There are 16 chains in PDB entry 6N7X (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	GLY 188
B	ARG 3	VAL 196
C	ALA 3	ARG 148
D	ASP 2	PHE 540
E	ALA 43	GLU 627
F	ASN 289	PHE 522
G	PHE 45	GLU 293
H	MET 1	SER 52
K	LYS 3	PRO 133
L	MET 1	SER 119
M	LEU 13	PRO 108
N	GLY 5	ARG 96
O	MET 10	SER 92
P	PRO 12	GLU 83
Q	VAL 2	ALA 76
R	U 11	U 565

There are112 helices in PDB entry 6N7X. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	9	14	Right-handed alpha
Helix 2	AA2	A	45	51	Right-handed alpha
Helix 3	AA3	A	51	59	Right-handed alpha
Helix 4	AA4	A	65	90	Right-handed alpha
Helix 5	AA5	A	119	129	Right-handed alpha
Helix 6	AA6	A	157	171	Right-handed alpha
Helix 7	AA7	B	17	26	Right-handed alpha
Helix 8	AA8	B	27	48	Right-handed alpha
Helix 9	AA9	B	60	67	Right-handed alpha
Helix 10	AB1	B	79	99	Right-handed alpha
Helix 11	AB2	B	103	109	Right-handed alpha
Helix 12	AB3	B	114	119	Right-handed alpha
Helix 13	AB4	B	127	132	Right-handed alpha
Helix 14	AB5	B	183	187	Right-handed 310
Helix 15	AB6	C	15	28	Right-handed alpha
Helix 16	AB7	C	83	95	Right-handed alpha
Helix 17	AB8	C	117	123	Right-handed alpha
Helix 18	AB9	C	133	148	Right-handed alpha
Helix 19	AC1	D	4	9	Right-handed alpha
Helix 20	AC2	D	10	23	Right-handed alpha
Helix 21	AC3	D	24	27	Right-handed 310
Helix 22	AC4	D	29	40	Right-handed alpha
Helix 23	AC5	D	49	64	Right-handed alpha
Helix 24	AC6	D	70	84	Right-handed alpha
Helix 25	AC7	D	86	101	Right-handed alpha
Helix 26	AC8	D	105	121	Right-handed alpha
Helix 27	AC9	D	122	138	Right-handed alpha
Helix 28	AD1	D	143	158	Right-handed alpha
Helix 29	AD2	D	162	172	Right-handed alpha
Helix 30	AD3	D	179	193	Right-handed alpha
Helix 31	AD4	D	195	200	Right-handed 310
Helix 32	AD5	D	204	212	Right-handed alpha
Helix 33	AD6	D	222	255	Right-handed alpha
Helix 34	AD7	D	272	290	Right-handed alpha
Helix 35	AD8	D	291	304	Right-handed alpha
Helix 36	AD9	D	310	323	Right-handed alpha
Helix 37	AE1	D	326	341	Right-handed alpha
Helix 38	AE2	D	344	359	Right-handed alpha
Helix 39	AE3	D	360	376	Right-handed alpha
Helix 40	AE4	D	384	403	Right-handed alpha
Helix 41	AE5	D	417	430	Right-handed alpha
Helix 42	AE6	D	436	443	Right-handed alpha
Helix 43	AE7	D	449	460	Right-handed alpha
Helix 44	AE8	D	462	467	Right-handed alpha
Helix 45	AE9	D	469	475	Right-handed alpha
Helix 46	AF1	D	475	488	Right-handed alpha
Helix 47	AF2	D	493	505	Right-handed alpha
Helix 48	AF3	D	506	509	Right-handed 310
Helix 49	AF4	D	512	516	Right-handed 310
Helix 50	AF5	D	517	529	Right-handed alpha
Helix 51	AF6	D	533	540	Right-handed alpha
Helix 52	AF7	E	44	63	Right-handed alpha
Helix 53	AF8	E	66	84	Right-handed alpha
Helix 54	AF9	E	87	101	Right-handed alpha
Helix 55	AG1	E	103	117	Right-handed alpha
Helix 56	AG2	E	121	131	Right-handed alpha
Helix 57	AG3	E	138	155	Right-handed alpha
Helix 58	AG4	E	160	174	Right-handed alpha
Helix 59	AG5	E	176	189	Right-handed alpha
Helix 60	AG6	E	194	206	Right-handed alpha
Helix 61	AG7	E	213	240	Right-handed alpha
Helix 62	AG8	E	247	252	Right-handed alpha
Helix 63	AG9	E	252	265	Right-handed alpha
Helix 64	AH1	E	270	285	Right-handed alpha
Helix 65	AH2	E	292	304	Right-handed alpha
Helix 66	AH3	E	306	321	Right-handed alpha
Helix 67	AH4	E	327	339	Right-handed alpha
Helix 68	AH5	E	340	342	Right-handed 310
Helix 69	AH6	E	344	362	Right-handed alpha
Helix 70	AH7	E	366	382	Right-handed alpha
Helix 71	AH8	E	388	412	Right-handed alpha
Helix 72	AH9	E	420	425	Right-handed alpha
Helix 73	AI1	E	429	444	Right-handed alpha
Helix 74	AI2	E	448	460	Right-handed alpha
Helix 75	AI3	E	467	481	Right-handed alpha
Helix 76	AI4	E	484	493	Right-handed alpha
Helix 77	AI5	E	501	520	Right-handed alpha
Helix 78	AI6	E	521	527	Right-handed alpha
Helix 79	AI7	E	539	544	Right-handed alpha
Helix 80	AI8	E	556	561	Right-handed alpha
Helix 81	AI9	E	565	570	Right-handed alpha
Helix 82	AJ1	E	591	596	Right-handed alpha
Helix 83	AJ2	E	607	612	Right-handed 310
Helix 84	AJ3	E	618	625	Right-handed alpha
Helix 85	AJ4	F	305	309	Right-handed 310
Helix 86	AJ5	F	325	334	Right-handed alpha
Helix 87	AJ6	F	357	366	Right-handed alpha
Helix 88	AJ7	F	385	399	Right-handed alpha
Helix 89	AJ8	F	497	518	Right-handed alpha
Helix 90	AJ9	G	46	57	Right-handed alpha
Helix 91	AK1	G	78	94	Right-handed alpha
Helix 92	AK2	G	121	142	Right-handed alpha
Helix 93	AK3	G	208	222	Right-handed alpha
Helix 94	AK4	G	231	252	Right-handed alpha
Helix 95	AK5	G	253	256	Right-handed 310
Helix 96	AK6	G	262	293	Right-handed alpha
Helix 97	AK7	H	8	14	Right-handed alpha
Helix 98	AK8	H	35	43	Right-handed alpha
Helix 99	AK9	H	43	52	Right-handed alpha
Helix 100	AL1	K	56	62	Right-handed 310
Helix 101	AL2	K	104	132	Right-handed alpha
Helix 102	AL3	L	3	8	Right-handed alpha
Helix 103	AL4	L	58	68	Right-handed alpha
Helix 104	AL5	L	102	107	Right-handed alpha
Helix 105	AL6	L	109	117	Right-handed alpha
Helix 106	AL7	M	14	28	Right-handed alpha
Helix 107	AL8	M	31	40	Right-handed alpha
Helix 108	AL9	N	6	14	Right-handed alpha
Helix 109	AM1	N	66	69	Right-handed 310
Helix 110	AM2	N	75	85	Right-handed 310
Helix 111	AM3	O	12	22	Right-handed alpha
Helix 112	AM4	P	14	22	Right-handed alpha

There are 16 sheets in PDB entry 6N7X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	133	140	first strand
Strand 2	A	147	155	anti-parallel
Strand 3	A	108	112	anti-parallel
Strand 4	A	179	185	anti-parallel
Strand 5	A	174	176	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	5	6	first strand
Strand 2	B	11	12	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	179	180	first strand
Strand 2	F	294	295	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	62	66	first strand
Strand 2	C	77	81	anti-parallel
Strand 3	C	4	6	anti-parallel
Strand 4	C	108	109	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	100	101	first strand
Strand 2	C	104	105	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	582	583	first strand
Strand 2	E	605	606	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	351	354	first strand
Strand 2	F	314	318	anti-parallel
Strand 3	F	379	382	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	69	75	first strand
Strand 2	G	112	118	anti-parallel
Strand 3	G	98	103	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	159	164	first strand
Strand 2	G	198	203	anti-parallel
Strand 3	G	188	189	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	167	168	first strand
Strand 2	G	223	224	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	20	21	first strand
Strand 2	H	5	7	anti-parallel
Strand 3	H	29	31	anti-parallel

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There are 24 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	78	82	first strand
Strand 2	K	48	52	anti-parallel
Strand 3	K	28	30	anti-parallel
Strand 4	K	20	24	anti-parallel
Strand 5	K	92	97	anti-parallel
Strand 6	L	79	87	anti-parallel
Strand 7	L	39	46	anti-parallel
Strand 8	L	24	30	anti-parallel
Strand 9	L	14	19	anti-parallel
Strand 10	L	92	97	anti-parallel
Strand 11	M	84	96	anti-parallel
Strand 12	M	67	79	anti-parallel
Strand 13	M	53	61	anti-parallel
Strand 14	M	44	48	anti-parallel
Strand 15	M	101	106	anti-parallel
Strand 16	P	70	73	anti-parallel
Strand 17	P	51	59	anti-parallel
Strand 18	P	36	45	anti-parallel
Strand 19	P	26	31	anti-parallel
Strand 20	P	78	82	anti-parallel
Strand 21	O	76	82	anti-parallel
Strand 22	O	52	61	anti-parallel
Strand 23	O	37	46	anti-parallel
Strand 24	O	26	30	anti-parallel

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There are 18 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	78	82	first strand
Strand 2	K	48	52	anti-parallel
Strand 3	K	28	30	anti-parallel
Strand 4	K	20	24	anti-parallel
Strand 5	K	92	97	anti-parallel
Strand 6	L	79	87	anti-parallel
Strand 7	L	39	46	anti-parallel
Strand 8	L	24	30	anti-parallel
Strand 9	L	14	19	anti-parallel
Strand 10	L	92	97	anti-parallel
Strand 11	M	84	96	anti-parallel
Strand 12	M	67	79	anti-parallel
Strand 13	M	53	61	anti-parallel
Strand 14	M	44	48	anti-parallel
Strand 15	M	101	106	anti-parallel
Strand 16	P	70	73	anti-parallel
Strand 17	P	51	59	anti-parallel
Strand 18	P	66	67	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	34	36	first strand
Strand 2	K	44	45	anti-parallel
Strand 3	K	85	87	anti-parallel
Strand 4	N	71	73	anti-parallel

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There are 10 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	18	20	first strand
Strand 2	N	28	36	anti-parallel
Strand 3	N	42	50	anti-parallel
Strand 4	N	56	64	anti-parallel
Strand 5	Q	68	73	anti-parallel
Strand 6	Q	14	19	anti-parallel
Strand 7	Q	23	32	anti-parallel
Strand 8	Q	38	46	anti-parallel
Strand 9	Q	60	63	anti-parallel
Strand 10	O	89	91	anti-parallel

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There are 9 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	18	20	first strand
Strand 2	N	28	36	anti-parallel
Strand 3	N	42	50	anti-parallel
Strand 4	N	56	64	anti-parallel
Strand 5	Q	68	73	anti-parallel
Strand 6	Q	14	19	anti-parallel
Strand 7	Q	23	32	anti-parallel
Strand 8	Q	38	46	anti-parallel
Strand 9	Q	55	56	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6N7X

Analysis of interatomic Contacts of Structural Units in PDB entry:
6N7X