Analysis of interatomic Contacts of Structural Units in PDB entry:
6N8V

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6N8V entry

There are 6 chains in PDB entry 6N8V (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 6	VAL 857
B	GLN 6	VAL 857
C	GLN 6	VAL 857
D	GLN 6	VAL 857
E	GLN 6	VAL 857
F	GLN 6	VAL 857

There are226 helices in PDB entry 6N8V. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	8	25	Right-handed alpha
Helix 2	AA2	A	34	39	Right-handed alpha
Helix 3	AA3	A	63	66	Right-handed 310
Helix 4	AA4	A	67	76	Right-handed alpha
Helix 5	AA5	A	89	99	Right-handed alpha
Helix 6	AA6	A	101	106	Right-handed alpha
Helix 7	AA7	A	112	120	Right-handed alpha
Helix 8	AA8	A	139	147	Right-handed alpha
Helix 9	AA9	A	174	180	Right-handed alpha
Helix 10	AB1	A	189	201	Right-handed alpha
Helix 11	AB2	A	217	231	Right-handed alpha
Helix 12	AB3	A	261	275	Right-handed alpha
Helix 13	AB4	A	301	306	Right-handed alpha
Helix 14	AB5	A	317	329	Right-handed alpha
Helix 15	AB6	A	329	334	Right-handed alpha
Helix 16	AB7	A	344	354	Right-handed alpha
Helix 17	AB8	A	354	360	Right-handed alpha
Helix 18	AB9	A	368	383	Right-handed alpha
Helix 19	AC1	A	387	404	Right-handed alpha
Helix 20	AC2	A	404	409	Right-handed alpha
Helix 21	AC3	A	541	546	Right-handed alpha
Helix 22	AC4	A	546	552	Right-handed alpha
Helix 23	AC5	A	556	561	Right-handed alpha
Helix 24	AC6	A	565	580	Right-handed alpha
Helix 25	AC7	A	583	598	Right-handed alpha
Helix 26	AC8	A	619	631	Right-handed alpha
Helix 27	AC9	A	644	646	Right-handed 310
Helix 28	AD1	A	649	655	Right-handed alpha
Helix 29	AD2	A	670	678	Right-handed alpha
Helix 30	AD3	A	687	691	Right-handed 310
Helix 31	AD4	A	692	704	Right-handed alpha
Helix 32	AD5	A	730	739	Right-handed alpha
Helix 33	AD6	A	742	757	Right-handed alpha
Helix 34	AD7	A	759	766	Right-handed alpha
Helix 35	AD8	A	776	796	Right-handed alpha
Helix 36	AD9	A	807	817	Right-handed alpha
Helix 37	AE1	A	824	835	Right-handed alpha
Helix 38	AE2	A	836	846	Right-handed alpha
Helix 39	AE3	B	8	25	Right-handed alpha
Helix 40	AE4	B	34	39	Right-handed alpha
Helix 41	AE5	B	63	66	Right-handed 310
Helix 42	AE6	B	67	76	Right-handed alpha
Helix 43	AE7	B	89	99	Right-handed alpha
Helix 44	AE8	B	101	106	Right-handed alpha
Helix 45	AE9	B	112	120	Right-handed alpha
Helix 46	AF1	B	139	147	Right-handed alpha
Helix 47	AF2	B	174	180	Right-handed alpha
Helix 48	AF3	B	189	202	Right-handed alpha
Helix 49	AF4	B	218	220	Right-handed 310
Helix 50	AF5	B	221	231	Right-handed alpha
Helix 51	AF6	B	235	240	Right-handed alpha
Helix 52	AF7	B	260	262	Right-handed 310
Helix 53	AF8	B	263	273	Right-handed alpha
Helix 54	AF9	B	301	307	Right-handed alpha
Helix 55	AG1	B	317	325	Right-handed alpha
Helix 56	AG2	B	329	334	Right-handed alpha
Helix 57	AG3	B	344	363	Right-handed alpha
Helix 58	AG4	B	368	383	Right-handed alpha
Helix 59	AG5	B	387	408	Right-handed alpha
Helix 60	AG6	B	542	554	Right-handed alpha
Helix 61	AG7	B	556	563	Right-handed alpha
Helix 62	AG8	B	565	570	Right-handed alpha
Helix 63	AG9	B	571	577	Right-handed alpha
Helix 64	AH1	B	583	598	Right-handed alpha
Helix 65	AH2	B	599	601	Right-handed 310
Helix 66	AH3	B	619	633	Right-handed alpha
Helix 67	AH4	B	642	646	Right-handed 310
Helix 68	AH5	B	649	655	Right-handed alpha
Helix 69	AH6	B	669	678	Right-handed alpha
Helix 70	AH7	B	695	704	Right-handed alpha
Helix 71	AH8	B	730	739	Right-handed alpha
Helix 72	AH9	B	742	758	Right-handed alpha
Helix 73	AI1	B	759	766	Right-handed alpha
Helix 74	AI2	B	776	793	Right-handed alpha
Helix 75	AI3	B	807	819	Right-handed alpha
Helix 76	AI4	B	825	832	Right-handed alpha
Helix 77	AI5	B	836	847	Right-handed alpha
Helix 78	AI6	C	8	25	Right-handed alpha
Helix 79	AI7	C	34	40	Right-handed alpha
Helix 80	AI8	C	53	59	Right-handed alpha
Helix 81	AI9	C	61	75	Right-handed alpha
Helix 82	AJ1	C	89	94	Right-handed alpha
Helix 83	AJ2	C	94	99	Right-handed alpha
Helix 84	AJ3	C	99	104	Right-handed alpha
Helix 85	AJ4	C	112	121	Right-handed alpha
Helix 86	AJ5	C	138	147	Right-handed alpha
Helix 87	AJ6	C	173	180	Right-handed alpha
Helix 88	AJ7	C	189	200	Right-handed alpha
Helix 89	AJ8	C	217	231	Right-handed alpha
Helix 90	AJ9	C	235	240	Right-handed alpha
Helix 91	AK1	C	261	275	Right-handed alpha
Helix 92	AK2	C	301	307	Right-handed alpha
Helix 93	AK3	C	317	329	Right-handed alpha
Helix 94	AK4	C	329	335	Right-handed alpha
Helix 95	AK5	C	344	363	Right-handed alpha
Helix 96	AK6	C	368	383	Right-handed alpha
Helix 97	AK7	C	390	409	Right-handed alpha
Helix 98	AK8	C	542	554	Right-handed alpha
Helix 99	AK9	C	556	562	Right-handed alpha
Helix 100	AL1	C	566	577	Right-handed alpha
Helix 101	AL2	C	583	597	Right-handed alpha
Helix 102	AL3	C	623	631	Right-handed alpha
Helix 103	AL4	C	669	678	Right-handed alpha
Helix 104	AL5	C	687	691	Right-handed 310
Helix 105	AL6	C	692	704	Right-handed alpha
Helix 106	AL7	C	730	737	Right-handed alpha
Helix 107	AL8	C	738	740	Right-handed 310
Helix 108	AL9	C	742	758	Right-handed alpha
Helix 109	AM1	C	759	766	Right-handed alpha
Helix 110	AM2	C	776	791	Right-handed alpha
Helix 111	AM3	C	792	794	Right-handed 310
Helix 112	AM4	C	807	817	Right-handed alpha
Helix 113	AM5	C	824	836	Right-handed alpha
Helix 114	AM6	C	836	847	Right-handed alpha
Helix 115	AM7	D	12	23	Right-handed alpha
Helix 116	AM8	D	32	40	Right-handed alpha
Helix 117	AM9	D	61	74	Right-handed alpha
Helix 118	AN1	D	89	100	Right-handed alpha
Helix 119	AN2	D	101	104	Right-handed 310
Helix 120	AN3	D	112	121	Right-handed alpha
Helix 121	AN4	D	137	147	Right-handed alpha
Helix 122	AN5	D	174	180	Right-handed alpha
Helix 123	AN6	D	189	200	Right-handed alpha
Helix 124	AN7	D	217	231	Right-handed alpha
Helix 125	AN8	D	235	241	Right-handed alpha
Helix 126	AN9	D	261	275	Right-handed alpha
Helix 127	AO1	D	301	307	Right-handed alpha
Helix 128	AO2	D	317	322	Right-handed alpha
Helix 129	AO3	D	323	329	Right-handed alpha
Helix 130	AO4	D	344	364	Right-handed alpha
Helix 131	AO5	D	368	383	Right-handed alpha
Helix 132	AO6	D	387	409	Right-handed alpha
Helix 133	AO7	D	411	433	Right-handed alpha
Helix 134	AO8	D	443	456	Right-handed alpha
Helix 135	AO9	D	458	465	Right-handed alpha
Helix 136	AP1	D	542	554	Right-handed alpha
Helix 137	AP2	D	556	563	Right-handed alpha
Helix 138	AP3	D	566	578	Right-handed alpha
Helix 139	AP4	D	583	597	Right-handed alpha
Helix 140	AP5	D	619	631	Right-handed alpha
Helix 141	AP6	D	642	646	Right-handed 310
Helix 142	AP7	D	649	655	Right-handed alpha
Helix 143	AP8	D	671	678	Right-handed alpha
Helix 144	AP9	D	687	691	Right-handed 310
Helix 145	AQ1	D	692	704	Right-handed alpha
Helix 146	AQ2	D	728	732	Right-handed 310
Helix 147	AQ3	D	733	739	Right-handed alpha
Helix 148	AQ4	D	742	758	Right-handed alpha
Helix 149	AQ5	D	759	765	Right-handed alpha
Helix 150	AQ6	D	776	799	Right-handed alpha
Helix 151	AQ7	D	807	819	Right-handed alpha
Helix 152	AQ8	D	827	846	Right-handed alpha
Helix 153	AQ9	E	8	25	Right-handed alpha
Helix 154	AR1	E	34	39	Right-handed alpha
Helix 155	AR2	E	63	66	Right-handed 310
Helix 156	AR3	E	67	76	Right-handed alpha
Helix 157	AR4	E	89	99	Right-handed alpha
Helix 158	AR5	E	101	106	Right-handed alpha
Helix 159	AR6	E	112	120	Right-handed alpha
Helix 160	AR7	E	139	147	Right-handed alpha
Helix 161	AR8	E	166	171	Right-handed alpha
Helix 162	AR9	E	173	181	Right-handed alpha
Helix 163	AS1	E	189	202	Right-handed alpha
Helix 164	AS2	E	217	231	Right-handed alpha
Helix 165	AS3	E	235	240	Right-handed alpha
Helix 166	AS4	E	261	276	Right-handed alpha
Helix 167	AS5	E	301	307	Right-handed alpha
Helix 168	AS6	E	317	329	Right-handed alpha
Helix 169	AS7	E	329	334	Right-handed alpha
Helix 170	AS8	E	345	363	Right-handed alpha
Helix 171	AS9	E	368	383	Right-handed alpha
Helix 172	AT1	E	387	408	Right-handed alpha
Helix 173	AT2	E	541	552	Right-handed alpha
Helix 174	AT3	E	556	563	Right-handed alpha
Helix 175	AT4	E	566	580	Right-handed alpha
Helix 176	AT5	E	583	598	Right-handed alpha
Helix 177	AT6	E	619	631	Right-handed alpha
Helix 178	AT7	E	649	655	Right-handed alpha
Helix 179	AT8	E	670	676	Right-handed alpha
Helix 180	AT9	E	687	691	Right-handed 310
Helix 181	AU1	E	692	704	Right-handed alpha
Helix 182	AU2	E	728	733	Right-handed 310
Helix 183	AU3	E	734	739	Right-handed alpha
Helix 184	AU4	E	742	758	Right-handed alpha
Helix 185	AU5	E	759	765	Right-handed alpha
Helix 186	AU6	E	776	793	Right-handed alpha
Helix 187	AU7	E	794	799	Right-handed alpha
Helix 188	AU8	E	807	819	Right-handed alpha
Helix 189	AU9	E	825	833	Right-handed alpha
Helix 190	AV1	E	834	846	Right-handed alpha
Helix 191	AV2	F	8	25	Right-handed alpha
Helix 192	AV3	F	34	39	Right-handed alpha
Helix 193	AV4	F	63	66	Right-handed 310
Helix 194	AV5	F	67	76	Right-handed alpha
Helix 195	AV6	F	89	99	Right-handed alpha
Helix 196	AV7	F	101	106	Right-handed alpha
Helix 197	AV8	F	112	120	Right-handed alpha
Helix 198	AV9	F	139	147	Right-handed alpha
Helix 199	AW1	F	164	170	Right-handed alpha
Helix 200	AW2	F	173	180	Right-handed alpha
Helix 201	AW3	F	189	202	Right-handed alpha
Helix 202	AW4	F	217	231	Right-handed alpha
Helix 203	AW5	F	235	240	Right-handed alpha
Helix 204	AW6	F	262	276	Right-handed alpha
Helix 205	AW7	F	317	322	Right-handed alpha
Helix 206	AW8	F	331	333	Right-handed 310
Helix 207	AW9	F	344	363	Right-handed alpha
Helix 208	AX1	F	368	383	Right-handed alpha
Helix 209	AX2	F	387	408	Right-handed alpha
Helix 210	AX3	F	542	551	Right-handed alpha
Helix 211	AX4	F	556	563	Right-handed alpha
Helix 212	AX5	F	566	580	Right-handed alpha
Helix 213	AX6	F	583	598	Right-handed alpha
Helix 214	AX7	F	619	633	Right-handed alpha
Helix 215	AX8	F	649	654	Right-handed alpha
Helix 216	AX9	F	670	678	Right-handed alpha
Helix 217	AY1	F	687	691	Right-handed 310
Helix 218	AY2	F	692	704	Right-handed alpha
Helix 219	AY3	F	729	739	Right-handed alpha
Helix 220	AY4	F	743	758	Right-handed alpha
Helix 221	AY5	F	759	765	Right-handed alpha
Helix 222	AY6	F	776	782	Right-handed alpha
Helix 223	AY7	F	782	793	Right-handed alpha
Helix 224	AY8	F	807	819	Right-handed alpha
Helix 225	AY9	F	825	833	Right-handed alpha
Helix 226	AZ1	F	836	847	Right-handed alpha

There are 21 sheets in PDB entry 6N8V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	172	173	first strand
Strand 2	A	243	245	anti-parallel
Strand 3	A	280	282	parallel
Strand 4	A	312	313	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	207	211	first strand
Strand 2	A	335	339	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	638	642	first strand
Strand 2	A	682	686	parallel
Strand 3	A	722	726	parallel
Strand 4	A	609	613	parallel
Strand 5	A	768	771	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	707	709	first strand
Strand 2	A	715	717	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	171	173	first strand
Strand 2	B	243	246	anti-parallel
Strand 3	B	280	282	parallel
Strand 4	B	312	316	parallel
Strand 5	B	207	211	parallel
Strand 6	B	335	339	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	681	686	first strand
Strand 2	B	721	727	parallel
Strand 3	B	608	613	parallel
Strand 4	B	768	770	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	707	708	first strand
Strand 2	B	716	717	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	208	211	first strand
Strand 2	C	336	339	parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	638	639	first strand
Strand 2	C	681	685	parallel
Strand 3	C	721	727	parallel
Strand 4	C	610	613	parallel
Strand 5	C	768	770	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	707	709	first strand
Strand 2	C	715	717	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	207	211	first strand
Strand 2	D	335	339	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	281	282	first strand
Strand 2	D	312	313	parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	638	640	first strand
Strand 2	D	682	684	parallel
Strand 3	D	722	727	parallel
Strand 4	D	609	613	parallel
Strand 5	D	768	771	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	707	708	first strand
Strand 2	D	716	717	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	207	209	first strand
Strand 2	E	335	337	parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	638	642	first strand
Strand 2	E	682	686	parallel
Strand 3	E	722	726	parallel
Strand 4	E	608	613	parallel
Strand 5	E	768	771	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	707	709	first strand
Strand 2	E	715	717	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	281	282	first strand
Strand 2	F	312	315	parallel
Strand 3	F	207	211	parallel
Strand 4	F	335	339	parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	723	726	first strand
Strand 2	F	609	613	parallel
Strand 3	F	768	771	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	638	642	first strand
Strand 2	F	682	686	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	707	709	first strand
Strand 2	F	715	717	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6N8V

Analysis of interatomic Contacts of Structural Units in PDB entry:
6N8V