Analysis of interatomic Contacts of Structural Units in PDB entry:
6N8Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6N8Y entry

There is 1 chain in PDB entry 6N8Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 11GLU 220
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 6N8Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 31Right-handed alpha
Helix 2
AA2
A
37 61Right-handed alpha
Helix 3
AA3
A
62 66Right-handed 310
Helix 4
AA4
A
94 100Right-handed alpha
Helix 5
AA5
A
100 119Right-handed alpha
Helix 6
AA6
A
122 130Right-handed 310
Helix 7
AA7
A
131 138Right-handed 310
Helix 8
AA8
A
187 193Right-handed 310
Helix 9
AA9
A
194 206Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6N8Y.

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 16first strand
Strand 2
A
164 169anti-parallel
Strand 3
A
155 159anti-parallel
Strand 4
A
140 148anti-parallel
Strand 5
A
178 185anti-parallel
Strand 6
A
83 88anti-parallel
Strand 7
A
73 78anti-parallel
Strand 8
A
213 215parallel
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