Analysis of interatomic Contacts of Structural Units in PDB entry:
6N8Z

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6N8Z entry

There are 6 chains in PDB entry 6N8Z (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 165	GLU 884
B	GLN 6	GLU 884
C	GLN 6	GLU 884
D	GLN 6	GLU 884
E	GLN 6	GLU 884
F	GLU 165	GLU 884

There are227 helices in PDB entry 6N8Z. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	166	171	Right-handed alpha
Helix 2	AA2	A	174	180	Right-handed alpha
Helix 3	AA3	A	189	201	Right-handed alpha
Helix 4	AA4	A	217	231	Right-handed alpha
Helix 5	AA5	A	235	239	Right-handed 310
Helix 6	AA6	A	247	252	Right-handed 310
Helix 7	AA7	A	259	274	Right-handed alpha
Helix 8	AA8	A	285	289	Right-handed 310
Helix 9	AA9	A	298	306	Right-handed 310
Helix 10	AB1	A	318	329	Right-handed alpha
Helix 11	AB2	A	330	334	Right-handed 310
Helix 12	AB3	A	344	364	Right-handed alpha
Helix 13	AB4	A	368	383	Right-handed alpha
Helix 14	AB5	A	387	410	Right-handed alpha
Helix 15	AB6	A	543	554	Right-handed alpha
Helix 16	AB7	A	556	560	Right-handed 310
Helix 17	AB8	A	571	580	Right-handed alpha
Helix 18	AB9	A	583	598	Right-handed alpha
Helix 19	AC1	A	599	601	Right-handed 310
Helix 20	AC2	A	619	633	Right-handed alpha
Helix 21	AC3	A	644	646	Right-handed 310
Helix 22	AC4	A	650	657	Right-handed alpha
Helix 23	AC5	A	671	676	Right-handed alpha
Helix 24	AC6	A	687	691	Right-handed 310
Helix 25	AC7	A	692	699	Right-handed alpha
Helix 26	AC8	A	699	704	Right-handed alpha
Helix 27	AC9	A	730	735	Right-handed alpha
Helix 28	AD1	A	745	758	Right-handed alpha
Helix 29	AD2	A	759	764	Right-handed alpha
Helix 30	AD3	A	775	795	Right-handed alpha
Helix 31	AD4	A	806	817	Right-handed alpha
Helix 32	AD5	A	825	835	Right-handed alpha
Helix 33	AD6	A	835	846	Right-handed alpha
Helix 34	AD7	B	8	25	Right-handed alpha
Helix 35	AD8	B	31	40	Right-handed alpha
Helix 36	AD9	B	61	76	Right-handed alpha
Helix 37	AE1	B	89	106	Right-handed alpha
Helix 38	AE2	B	112	124	Right-handed alpha
Helix 39	AE3	B	136	146	Right-handed alpha
Helix 40	AE4	B	165	169	Right-handed 310
Helix 41	AE5	B	174	180	Right-handed alpha
Helix 42	AE6	B	189	201	Right-handed alpha
Helix 43	AE7	B	217	231	Right-handed alpha
Helix 44	AE8	B	235	240	Right-handed alpha
Helix 45	AE9	B	248	253	Right-handed alpha
Helix 46	AF1	B	259	274	Right-handed alpha
Helix 47	AF2	B	285	290	Right-handed 310
Helix 48	AF3	B	300	306	Right-handed alpha
Helix 49	AF4	B	318	326	Right-handed alpha
Helix 50	AF5	B	329	335	Right-handed alpha
Helix 51	AF6	B	344	364	Right-handed alpha
Helix 52	AF7	B	368	383	Right-handed alpha
Helix 53	AF8	B	387	409	Right-handed alpha
Helix 54	AF9	B	542	555	Right-handed alpha
Helix 55	AG1	B	556	561	Right-handed 310
Helix 56	AG2	B	562	564	Right-handed 310
Helix 57	AG3	B	565	580	Right-handed alpha
Helix 58	AG4	B	583	599	Right-handed alpha
Helix 59	AG5	B	619	633	Right-handed alpha
Helix 60	AG6	B	634	638	Right-handed 310
Helix 61	AG7	B	644	646	Right-handed 310
Helix 62	AG8	B	651	657	Right-handed alpha
Helix 63	AG9	B	671	676	Right-handed alpha
Helix 64	AH1	B	687	691	Right-handed 310
Helix 65	AH2	B	692	703	Right-handed alpha
Helix 66	AH3	B	730	735	Right-handed alpha
Helix 67	AH4	B	745	756	Right-handed alpha
Helix 68	AH5	B	759	764	Right-handed alpha
Helix 69	AH6	B	776	795	Right-handed alpha
Helix 70	AH7	B	808	817	Right-handed alpha
Helix 71	AH8	B	825	836	Right-handed alpha
Helix 72	AH9	B	836	846	Right-handed alpha
Helix 73	AI1	C	8	25	Right-handed alpha
Helix 74	AI2	C	31	40	Right-handed alpha
Helix 75	AI3	C	53	58	Right-handed alpha
Helix 76	AI4	C	61	74	Right-handed alpha
Helix 77	AI5	C	89	107	Right-handed alpha
Helix 78	AI6	C	112	124	Right-handed alpha
Helix 79	AI7	C	136	145	Right-handed alpha
Helix 80	AI8	C	165	169	Right-handed 310
Helix 81	AI9	C	174	180	Right-handed alpha
Helix 82	AJ1	C	189	201	Right-handed alpha
Helix 83	AJ2	C	217	231	Right-handed alpha
Helix 84	AJ3	C	248	253	Right-handed alpha
Helix 85	AJ4	C	259	274	Right-handed alpha
Helix 86	AJ5	C	285	290	Right-handed 310
Helix 87	AJ6	C	294	298	Right-handed 310
Helix 88	AJ7	C	301	306	Right-handed alpha
Helix 89	AJ8	C	317	329	Right-handed alpha
Helix 90	AJ9	C	330	335	Right-handed alpha
Helix 91	AK1	C	344	364	Right-handed alpha
Helix 92	AK2	C	368	383	Right-handed alpha
Helix 93	AK3	C	387	410	Right-handed alpha
Helix 94	AK4	C	542	555	Right-handed alpha
Helix 95	AK5	C	556	561	Right-handed 310
Helix 96	AK6	C	562	564	Right-handed 310
Helix 97	AK7	C	565	580	Right-handed alpha
Helix 98	AK8	C	583	599	Right-handed alpha
Helix 99	AK9	C	619	633	Right-handed alpha
Helix 100	AL1	C	634	638	Right-handed 310
Helix 101	AL2	C	647	657	Right-handed alpha
Helix 102	AL3	C	671	676	Right-handed alpha
Helix 103	AL4	C	687	691	Right-handed 310
Helix 104	AL5	C	692	703	Right-handed alpha
Helix 105	AL6	C	730	735	Right-handed alpha
Helix 106	AL7	C	745	758	Right-handed alpha
Helix 107	AL8	C	759	764	Right-handed alpha
Helix 108	AL9	C	776	794	Right-handed alpha
Helix 109	AM1	C	806	818	Right-handed alpha
Helix 110	AM2	C	820	824	Right-handed 310
Helix 111	AM3	C	825	836	Right-handed alpha
Helix 112	AM4	C	836	846	Right-handed alpha
Helix 113	AM5	D	8	25	Right-handed alpha
Helix 114	AM6	D	31	40	Right-handed alpha
Helix 115	AM7	D	61	76	Right-handed alpha
Helix 116	AM8	D	88	107	Right-handed alpha
Helix 117	AM9	D	112	124	Right-handed alpha
Helix 118	AN1	D	136	146	Right-handed alpha
Helix 119	AN2	D	166	170	Right-handed alpha
Helix 120	AN3	D	174	180	Right-handed alpha
Helix 121	AN4	D	189	201	Right-handed alpha
Helix 122	AN5	D	217	231	Right-handed alpha
Helix 123	AN6	D	235	240	Right-handed alpha
Helix 124	AN7	D	248	253	Right-handed alpha
Helix 125	AN8	D	259	274	Right-handed alpha
Helix 126	AN9	D	285	291	Right-handed 310
Helix 127	AO1	D	294	298	Right-handed 310
Helix 128	AO2	D	301	306	Right-handed alpha
Helix 129	AO3	D	318	328	Right-handed alpha
Helix 130	AO4	D	329	335	Right-handed alpha
Helix 131	AO5	D	344	364	Right-handed alpha
Helix 132	AO6	D	368	383	Right-handed alpha
Helix 133	AO7	D	387	409	Right-handed alpha
Helix 134	AO8	D	542	555	Right-handed alpha
Helix 135	AO9	D	556	560	Right-handed 310
Helix 136	AP1	D	562	564	Right-handed 310
Helix 137	AP2	D	565	578	Right-handed alpha
Helix 138	AP3	D	583	599	Right-handed alpha
Helix 139	AP4	D	619	633	Right-handed alpha
Helix 140	AP5	D	634	638	Right-handed 310
Helix 141	AP6	D	642	646	Right-handed 310
Helix 142	AP7	D	650	657	Right-handed alpha
Helix 143	AP8	D	670	678	Right-handed alpha
Helix 144	AP9	D	693	703	Right-handed alpha
Helix 145	AQ1	D	730	735	Right-handed alpha
Helix 146	AQ2	D	745	758	Right-handed alpha
Helix 147	AQ3	D	759	764	Right-handed alpha
Helix 148	AQ4	D	776	795	Right-handed alpha
Helix 149	AQ5	D	808	818	Right-handed alpha
Helix 150	AQ6	D	820	824	Right-handed 310
Helix 151	AQ7	D	825	836	Right-handed alpha
Helix 152	AQ8	D	836	846	Right-handed alpha
Helix 153	AQ9	E	8	25	Right-handed alpha
Helix 154	AR1	E	31	39	Right-handed alpha
Helix 155	AR2	E	61	76	Right-handed alpha
Helix 156	AR3	E	88	106	Right-handed alpha
Helix 157	AR4	E	112	124	Right-handed alpha
Helix 158	AR5	E	136	147	Right-handed alpha
Helix 159	AR6	E	166	170	Right-handed alpha
Helix 160	AR7	E	174	180	Right-handed alpha
Helix 161	AR8	E	189	201	Right-handed alpha
Helix 162	AR9	E	217	231	Right-handed alpha
Helix 163	AS1	E	235	240	Right-handed alpha
Helix 164	AS2	E	248	253	Right-handed alpha
Helix 165	AS3	E	259	274	Right-handed alpha
Helix 166	AS4	E	285	291	Right-handed 310
Helix 167	AS5	E	294	298	Right-handed 310
Helix 168	AS6	E	301	307	Right-handed alpha
Helix 169	AS7	E	317	322	Right-handed alpha
Helix 170	AS8	E	323	329	Right-handed alpha
Helix 171	AS9	E	329	335	Right-handed alpha
Helix 172	AT1	E	344	364	Right-handed alpha
Helix 173	AT2	E	368	383	Right-handed alpha
Helix 174	AT3	E	387	410	Right-handed alpha
Helix 175	AT4	E	542	555	Right-handed alpha
Helix 176	AT5	E	556	561	Right-handed 310
Helix 177	AT6	E	562	564	Right-handed 310
Helix 178	AT7	E	565	571	Right-handed alpha
Helix 179	AT8	E	571	577	Right-handed alpha
Helix 180	AT9	E	583	599	Right-handed alpha
Helix 181	AU1	E	619	633	Right-handed alpha
Helix 182	AU2	E	634	638	Right-handed 310
Helix 183	AU3	E	650	656	Right-handed alpha
Helix 184	AU4	E	670	676	Right-handed alpha
Helix 185	AU5	E	687	691	Right-handed 310
Helix 186	AU6	E	692	703	Right-handed alpha
Helix 187	AU7	E	730	735	Right-handed alpha
Helix 188	AU8	E	745	756	Right-handed alpha
Helix 189	AU9	E	759	765	Right-handed alpha
Helix 190	AV1	E	776	794	Right-handed alpha
Helix 191	AV2	E	808	818	Right-handed alpha
Helix 192	AV3	E	820	825	Right-handed 310
Helix 193	AV4	E	826	836	Right-handed alpha
Helix 194	AV5	E	836	846	Right-handed alpha
Helix 195	AV6	F	166	171	Right-handed alpha
Helix 196	AV7	F	174	180	Right-handed alpha
Helix 197	AV8	F	189	201	Right-handed alpha
Helix 198	AV9	F	217	231	Right-handed alpha
Helix 199	AW1	F	235	240	Right-handed alpha
Helix 200	AW2	F	248	253	Right-handed alpha
Helix 201	AW3	F	259	272	Right-handed alpha
Helix 202	AW4	F	285	289	Right-handed 310
Helix 203	AW5	F	300	306	Right-handed alpha
Helix 204	AW6	F	318	329	Right-handed alpha
Helix 205	AW7	F	329	334	Right-handed alpha
Helix 206	AW8	F	344	364	Right-handed alpha
Helix 207	AW9	F	368	383	Right-handed alpha
Helix 208	AX1	F	387	408	Right-handed alpha
Helix 209	AX2	F	545	555	Right-handed alpha
Helix 210	AX3	F	556	560	Right-handed 310
Helix 211	AX4	F	569	580	Right-handed alpha
Helix 212	AX5	F	583	596	Right-handed alpha
Helix 213	AX6	F	597	601	Right-handed 310
Helix 214	AX7	F	621	632	Right-handed alpha
Helix 215	AX8	F	634	638	Right-handed 310
Helix 216	AX9	F	652	657	Right-handed alpha
Helix 217	AY1	F	671	676	Right-handed alpha
Helix 218	AY2	F	687	691	Right-handed 310
Helix 219	AY3	F	692	703	Right-handed alpha
Helix 220	AY4	F	730	735	Right-handed alpha
Helix 221	AY5	F	743	758	Right-handed alpha
Helix 222	AY6	F	759	764	Right-handed alpha
Helix 223	AY7	F	776	795	Right-handed alpha
Helix 224	AY8	F	806	818	Right-handed alpha
Helix 225	AY9	F	820	824	Right-handed 310
Helix 226	AZ1	F	825	836	Right-handed alpha
Helix 227	AZ2	F	836	846	Right-handed alpha

There are 24 sheets in PDB entry 6N8Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	172	173	first strand
Strand 2	A	242	245	anti-parallel
Strand 3	A	279	282	parallel
Strand 4	A	312	317	parallel
Strand 5	A	208	212	parallel
Strand 6	A	336	339	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	366	367	first strand
Strand 2	A	539	540	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	639	642	first strand
Strand 2	A	683	686	parallel
Strand 3	A	723	727	parallel
Strand 4	A	609	614	parallel
Strand 5	A	768	772	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	709	710	first strand
Strand 2	A	714	715	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	171	173	first strand
Strand 2	B	241	246	anti-parallel
Strand 3	B	278	283	parallel
Strand 4	B	312	317	parallel
Strand 5	B	208	212	parallel
Strand 6	B	336	339	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	366	367	first strand
Strand 2	B	540	541	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	639	642	first strand
Strand 2	B	682	686	parallel
Strand 3	B	722	727	parallel
Strand 4	B	608	613	parallel
Strand 5	B	768	771	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	709	710	first strand
Strand 2	B	714	715	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	802	804	first strand
Strand 2	B	853	857	parallel
Strand 3	B	875	877	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	171	173	first strand
Strand 2	C	242	246	anti-parallel
Strand 3	C	279	283	parallel
Strand 4	C	312	316	parallel
Strand 5	C	208	211	parallel
Strand 6	C	336	339	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	366	367	first strand
Strand 2	C	540	541	parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	639	641	first strand
Strand 2	C	682	685	parallel
Strand 3	C	722	727	parallel
Strand 4	C	608	613	parallel
Strand 5	C	768	771	parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	802	804	first strand
Strand 2	C	853	857	parallel
Strand 3	C	875	877	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	171	173	first strand
Strand 2	D	242	246	anti-parallel
Strand 3	D	279	283	parallel
Strand 4	D	312	317	parallel
Strand 5	D	208	212	parallel
Strand 6	D	336	339	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	366	367	first strand
Strand 2	D	540	541	parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	639	641	first strand
Strand 2	D	682	685	parallel
Strand 3	D	722	727	parallel
Strand 4	D	608	613	parallel
Strand 5	D	768	771	parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	802	804	first strand
Strand 2	D	853	857	parallel
Strand 3	D	875	877	anti-parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	171	173	first strand
Strand 2	E	241	246	anti-parallel
Strand 3	E	278	283	parallel
Strand 4	E	312	316	parallel
Strand 5	E	208	211	parallel
Strand 6	E	336	339	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	366	367	first strand
Strand 2	E	540	541	parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	639	641	first strand
Strand 2	E	682	685	parallel
Strand 3	E	722	727	parallel
Strand 4	E	608	613	parallel
Strand 5	E	768	771	parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	802	804	first strand
Strand 2	E	853	857	parallel
Strand 3	E	875	877	anti-parallel

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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	172	173	first strand
Strand 2	F	242	245	anti-parallel
Strand 3	F	279	283	parallel
Strand 4	F	312	317	parallel
Strand 5	F	207	212	parallel
Strand 6	F	335	339	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	366	367	first strand
Strand 2	F	539	540	parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	639	641	first strand
Strand 2	F	682	685	parallel
Strand 3	F	722	726	parallel
Strand 4	F	608	614	parallel
Strand 5	F	768	772	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6N8Z

Analysis of interatomic Contacts of Structural Units in PDB entry:
6N8Z