Analysis of interatomic Contacts of Structural Units in PDB entry:
6N98


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6N98 entry

There is 1 chain in PDB entry 6N98 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 4ARG 382
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 6N98. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 10Right-handed 310
Helix 2
AA2
A
16 20Right-handed alpha
Helix 3
AA3
A
36 47Right-handed alpha
Helix 4
AA4
A
57 61Right-handed 310
Helix 5
AA5
A
65 81Right-handed alpha
Helix 6
AA6
A
94 98Right-handed 310
Helix 7
AA7
A
106 128Right-handed alpha
Helix 8
AA8
A
143 147Right-handed 310
Helix 9
AA9
A
148 171Right-handed alpha
Helix 10
AB1
A
193 202Right-handed alpha
Helix 11
AB2
A
206 208Right-handed 310
Helix 12
AB3
A
215 222Right-handed alpha
Helix 13
AB4
A
225 236Right-handed alpha
Helix 14
AB5
A
262 277Right-handed alpha
Helix 15
AB6
A
293 321Right-handed alpha
Helix 16
AB7
A
321 331Right-handed alpha
Helix 17
AB8
A
332 338Right-handed 310
Helix 18
AB9
A
346 353Right-handed alpha
Helix 19
AC1
A
366 379Right-handed alpha
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There are 2 sheets in PDB entry 6N98. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
210 212first strand
Strand 2
A
175 178parallel
Strand 3
A
131 134parallel
Strand 4
A
86 88parallel
Strand 5
A
51 55parallel
Strand 6
A
12 15parallel
Strand 7
A
282 284parallel
Strand 8
A
243 244parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
140 141first strand
Strand 2
A
188 189anti-parallel
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