Analysis of interatomic Contacts of Structural Units in PDB entry:
6N9L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6N9L entry

There is 1 chain in PDB entry 6N9L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 2LEU 916
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 6N9L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
36 42Right-handed alpha
Helix 2
AA2
A
44 55Right-handed alpha
Helix 3
AA3
A
97 102Right-handed alpha
Helix 4
AA4
A
103 114Right-handed alpha
Helix 5
AA5
A
405 411Right-handed alpha
Helix 6
AA6
A
413 423Right-handed alpha
Helix 7
AA7
A
429 451Right-handed alpha
Helix 8
AA8
A
461 465Right-handed 310
Helix 9
AA9
A
466 482Right-handed alpha
Helix 10
AB1
A
498 500Right-handed 310
Helix 11
AB2
A
501 515Right-handed alpha
Helix 12
AB3
A
525 531Right-handed alpha
Helix 13
AB4
A
542 546Right-handed 310
Helix 14
AB5
A
554 561Right-handed alpha
Helix 15
AB6
A
565 572Right-handed alpha
Helix 16
AB7
A
622 628Right-handed alpha
Helix 17
AB8
A
630 640Right-handed alpha
Helix 18
AB9
A
654 658Right-handed 310
Helix 19
AC1
A
676 681Right-handed alpha
Helix 20
AC2
A
682 693Right-handed alpha
Helix 21
AC3
A
694 701Right-handed alpha
Helix 22
AC4
A
703 708Right-handed 310
Helix 23
AC5
A
748 753Right-handed alpha
Helix 24
AC6
A
760 766Right-handed alpha
Helix 25
AC7
A
768 776Right-handed alpha
Helix 26
AC8
A
779 792Right-handed alpha
Helix 27
AC9
A
802 806Right-handed 310
Helix 28
AD1
A
807 822Right-handed alpha
Helix 29
AD2
A
840 857Right-handed alpha
Helix 30
AD3
A
867 872Right-handed alpha
Helix 31
AD4
A
884 888Right-handed 310
Helix 32
AD5
A
896 902Right-handed alpha
Helix 33
AD6
A
906 913Right-handed alpha
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There are 5 sheets in PDB entry 6N9L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 22first strand
Strand 2
A
3 9anti-parallel
Strand 3
A
75 77anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
82 85first strand
Strand 2
A
487 491parallel
Strand 3
A
518 522parallel
Strand 4
A
26 30parallel
Strand 5
A
534 539parallel
Strand 6
A
548 553anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
603 609first strand
Strand 2
A
588 595anti-parallel
Strand 3
A
651 653anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
660 663first strand
Strand 2
A
828 833parallel
Strand 3
A
860 864parallel
Strand 4
A
612 616parallel
Strand 5
A
876 881parallel
Strand 6
A
890 895anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
724 726first strand
Strand 2
A
736 738anti-parallel
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