Analysis of interatomic Contacts of Structural Units in PDB entry:
6N9M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6N9M entry

There is 1 chain in PDB entry 6N9M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1ALA 331
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 6N9M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 18Right-handed 310
Helix 2
AA2
A
20 32Right-handed alpha
Helix 3
AA3
A
39 48Right-handed alpha
Helix 4
AA4
A
55 62Right-handed alpha
Helix 5
AA5
A
63 69Right-handed alpha
Helix 6
AA6
A
72 90Right-handed alpha
Helix 7
AA7
A
100 106Right-handed alpha
Helix 8
AA8
A
111 131Right-handed alpha
Helix 9
AA9
A
145 158Right-handed alpha
Helix 10
AB1
A
159 163Right-handed 310
Helix 11
AB2
A
176 179Right-handed 310
Helix 12
AB3
A
180 190Right-handed alpha
Helix 13
AB4
A
203 213Right-handed alpha
Helix 14
AB5
A
223 227Right-handed 310
Helix 15
AB6
A
228 239Right-handed alpha
Helix 16
AB7
A
245 252Right-handed alpha
Helix 17
AB8
A
257 261Right-handed 310
Helix 18
AB9
A
262 269Right-handed alpha
Helix 19
AC1
A
279 284Right-handed alpha
Helix 20
AC2
A
286 293Right-handed alpha
Helix 21
AC3
A
293 298Right-handed alpha
Helix 22
AC4
A
301 315Right-handed alpha
Helix 23
AC5
A
319 331Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6N9M.

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 14first strand
Strand 2
A
94 99parallel
Strand 3
A
133 141parallel
Strand 4
A
165 169parallel
Strand 5
A
193 198parallel
Strand 6
A
218 221parallel
Strand 7
A
241 244parallel
Strand 8
A
273 275parallel
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