Analysis of interatomic Contacts of Structural Units in PDB entry:
6NC5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6NC5 entry

There is 1 chain in PDB entry 6NC5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 15GLN 273
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 6NC5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 21Right-handed alpha
Helix 2
AA2
A
59 61Right-handed 310
Helix 3
AA3
A
62 73Right-handed alpha
Helix 4
AA4
A
76 78Right-handed 310
Helix 5
AA5
A
89 94Right-handed alpha
Helix 6
AA6
A
95 104Right-handed alpha
Helix 7
AA7
A
111 119Right-handed alpha
Helix 8
AA8
A
201 215Right-handed alpha
Helix 9
AA9
A
225 229Right-handed 310
Helix 10
AB1
A
230 240Right-handed alpha
Helix 11
AB2
A
250 272Right-handed alpha
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There are 2 sheets in PDB entry 6NC5. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 30first strand
Strand 2
A
33 35anti-parallel
Strand 3
A
44 48anti-parallel
Strand 4
A
51 55anti-parallel
Strand 5
A
80 84parallel
Strand 6
A
106 110parallel
Strand 7
A
140 142parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 150first strand
Strand 2
A
153 159anti-parallel
Strand 3
A
168 173anti-parallel
Strand 4
A
179 183anti-parallel
Strand 5
A
220 223parallel
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