Analysis of interatomic Contacts of Structural Units in PDB entry:
6NE4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6NE4 entry

There are 2 chains in PDB entry 6NE4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 MET -1GLU 192
A
 GLY 2HIS 120
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 6NE4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
-1 14Right-handed alpha
Helix 2
AA2
B
15 25Right-handed alpha
Helix 3
AA3
B
38 46Right-handed alpha
Helix 4
AA4
B
48 58Right-handed alpha
Helix 5
AA5
B
71 80Right-handed alpha
Helix 6
AA6
B
81 91Right-handed alpha
Helix 7
AA7
B
104 112Right-handed alpha
Helix 8
AA8
B
114 124Right-handed alpha
Helix 9
AA9
B
132 136Right-handed 310
Helix 10
AB1
B
137 146Right-handed alpha
Helix 11
AB2
B
147 157Right-handed alpha
Helix 12
AB3
B
170 178Right-handed alpha
Helix 13
AB4
B
180 192Right-handed alpha
Helix 14
AB5
A
9 13Right-handed 310
Helix 15
AB6
A
30 40Right-handed alpha
Helix 16
AB7
A
41 48Right-handed alpha
Helix 17
AB8
A
52 62Right-handed alpha
Helix 18
AB9
A
75 84Right-handed alpha
Helix 19
AC1
A
85 93Right-handed alpha
Helix 20
AC2
A
98 106Right-handed 310
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There is 1 sheet (AA1) in PDB entry 6NE4.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 6first strand
Strand 2
A
19 22anti-parallel
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