Analysis of interatomic Contacts of Structural Units in PDB entry:
6NE6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6NE6 entry

There is 1 chain in PDB entry 6NE6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 27LEU 353
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 6NE6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
45 57Right-handed alpha
Helix 2
AA2
A
62 91Right-handed alpha
Helix 3
AA3
A
97 114Right-handed alpha
Helix 4
AA4
A
115 117Right-handed 310
Helix 5
AA5
A
123 134Right-handed alpha
Helix 6
AA6
A
136 145Right-handed alpha
Helix 7
AA7
A
146 149Right-handed 310
Helix 8
AA8
A
154 161Right-handed alpha
Helix 9
AA9
A
161 166Right-handed alpha
Helix 10
AB1
A
173 179Right-handed alpha
Helix 11
AB2
A
210 218Right-handed 310
Helix 12
AB3
A
231 235Right-handed 310
Helix 13
AB4
A
244 260Right-handed alpha
Helix 14
AB5
A
273 283Right-handed alpha
Helix 15
AB6
A
286 290Right-handed 310
Helix 16
AB7
A
300 316Right-handed alpha
Helix 17
AB8
A
331 351Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6NE6.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
188 194first strand
Strand 2
A
197 203anti-parallel
Strand 3
A
34 40parallel
Strand 4
A
223 229parallel
Strand 5
A
266 272parallel
Strand 6
A
321 326parallel
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