Analysis of interatomic Contacts of Structural Units in PDB entry:
6NF4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6NF4 entry

There are 2 chains in PDB entry 6NF4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 46LYS 585
B
 LYS 46LYS 585
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 6NF4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
48 76Right-handed alpha
Helix 2
AA2
A
82 109Right-handed alpha
Helix 3
AA3
A
124 150Right-handed alpha
Helix 4
AA4
A
158 181Right-handed alpha
Helix 5
AA5
A
190 213Right-handed alpha
Helix 6
AA6
A
215 220Right-handed alpha
Helix 7
AA7
A
249 283Right-handed alpha
Helix 8
AA8
A
304 330Right-handed alpha
Helix 9
AA9
A
334 367Right-handed alpha
Helix 10
AB1
A
376 409Right-handed alpha
Helix 11
AB2
A
417 442Right-handed alpha
Helix 12
AB3
A
511 537Right-handed alpha
Helix 13
AB4
A
540 545Right-handed 310
Helix 14
AB5
A
553 584Right-handed alpha
Helix 15
AB6
B
48 76Right-handed alpha
Helix 16
AB7
B
82 109Right-handed alpha
Helix 17
AB8
B
124 150Right-handed alpha
Helix 18
AB9
B
158 181Right-handed alpha
Helix 19
AC1
B
190 213Right-handed alpha
Helix 20
AC2
B
215 220Right-handed alpha
Helix 21
AC3
B
249 283Right-handed alpha
Helix 22
AC4
B
304 330Right-handed alpha
Helix 23
AC5
B
334 367Right-handed alpha
Helix 24
AC6
B
376 409Right-handed alpha
Helix 25
AC7
B
417 442Right-handed alpha
Helix 26
AC8
B
511 537Right-handed alpha
Helix 27
AC9
B
540 545Right-handed 310
Helix 28
AD1
B
553 584Right-handed alpha
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There are no sheets in PDB entry 6NF4
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il