Analysis of interatomic Contacts of Structural Units in PDB entry:
6NHI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6NHI entry

There is 1 chain in PDB entry 6NHI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0LYS 449
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 6NHI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 34Right-handed alpha
Helix 2
AA2
A
47 51Right-handed alpha
Helix 3
AA3
A
58 62Right-handed 310
Helix 4
AA4
A
76 83Right-handed alpha
Helix 5
AA5
A
84 93Right-handed alpha
Helix 6
AA6
A
101 113Right-handed alpha
Helix 7
AA7
A
114 116Right-handed 310
Helix 8
AA8
A
155 173Right-handed alpha
Helix 9
AA9
A
183 194Right-handed alpha
Helix 10
AB1
A
198 207Right-handed alpha
Helix 11
AB2
A
208 224Right-handed alpha
Helix 12
AB3
A
227 234Right-handed alpha
Helix 13
AB4
A
235 239Right-handed 310
Helix 14
AB5
A
243 255Right-handed alpha
Helix 15
AB6
A
258 278Right-handed alpha
Helix 16
AB7
A
325 329Right-handed 310
Helix 17
AB8
A
341 352Right-handed alpha
Helix 18
AB9
A
371 388Right-handed alpha
Helix 19
AC1
A
400 412Right-handed alpha
Helix 20
AC2
A
420 427Right-handed alpha
Helix 21
AC3
A
444 449Right-handed alpha
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There are 3 sheets in PDB entry 6NHI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 38first strand
Strand 2
A
120 129parallel
Strand 3
A
141 150anti-parallel
Strand 4
A
335 340anti-parallel
Strand 5
A
316 321anti-parallel
Strand 6
A
298 307anti-parallel
Strand 7
A
176 182anti-parallel
Strand 8
A
285 287parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 46first strand
Strand 2
A
95 97anti-parallel
Strand 3
A
64 65anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
392 394first strand
Strand 2
A
365 367parallel
Strand 3
A
415 418parallel
Strand 4
A
428 433anti-parallel
Strand 5
A
439 443anti-parallel
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