Analysis of interatomic Contacts of Structural Units in PDB entry:
6NHL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6NHL entry

There are 2 chains in PDB entry 6NHL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -10HIS 217
B
 HIS -10HIS 217
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 6NHL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
-8 1Right-handed alpha
Helix 2
AA2
A
15 19Right-handed 310
Helix 3
AA3
A
40 44Right-handed 310
Helix 4
AA4
A
47 51Right-handed 310
Helix 5
AA5
A
53 59Right-handed alpha
Helix 6
AA6
A
71 83Right-handed alpha
Helix 7
AA7
A
95 99Right-handed 310
Helix 8
AA8
A
101 111Right-handed alpha
Helix 9
AA9
A
148 155Right-handed alpha
Helix 10
AB1
A
164 176Right-handed alpha
Helix 11
AB2
A
197 209Right-handed alpha
Helix 12
AB3
B
-8 1Right-handed alpha
Helix 13
AB4
B
15 19Right-handed 310
Helix 14
AB5
B
40 44Right-handed 310
Helix 15
AB6
B
47 51Right-handed 310
Helix 16
AB7
B
53 59Right-handed alpha
Helix 17
AB8
B
71 83Right-handed alpha
Helix 18
AB9
B
95 99Right-handed 310
Helix 19
AC1
B
101 111Right-handed alpha
Helix 20
AC2
B
148 155Right-handed alpha
Helix 21
AC3
B
164 176Right-handed alpha
Helix 22
AC4
B
194 209Right-handed alpha
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There are 2 sheets in PDB entry 6NHL. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 70first strand
Strand 2
A
3 12anti-parallel
Strand 3
A
22 28anti-parallel
Strand 4
A
88 92parallel
Strand 5
A
114 119parallel
Strand 6
A
132 135parallel
Strand 7
A
157 162parallel
Strand 8
A
185 190parallel
Strand 9
A
211 212parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
68 70first strand
Strand 2
B
3 12anti-parallel
Strand 3
B
22 28anti-parallel
Strand 4
B
88 92parallel
Strand 5
B
114 119parallel
Strand 6
B
132 135parallel
Strand 7
B
157 162parallel
Strand 8
B
185 190parallel
Strand 9
B
211 212parallel
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