Analysis of interatomic Contacts of Structural Units in PDB entry:
6NHZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6NHZ entry

There is 1 chain in PDB entry 6NHZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 451GLU 759
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 6NHZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
454 458Right-handed 310
Helix 2
AA2
A
506 514Right-handed 310
Helix 3
AA3
A
541 547Right-handed alpha
Helix 4
AA4
A
573 586Right-handed alpha
Helix 5
AA5
A
599 610Right-handed alpha
Helix 6
AA6
A
685 696Right-handed alpha
Helix 7
AA7
A
710 715Right-handed alpha
Helix 8
AA8
A
752 756Right-handed 310
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There are 4 sheets in PDB entry 6NHZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
462 465first strand
Strand 2
A
629 637parallel
Strand 3
A
614 619anti-parallel
Strand 4
A
476 480anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
495 499first strand
Strand 2
A
485 492anti-parallel
Strand 3
A
524 532anti-parallel
Strand 4
A
555 564anti-parallel
Strand 5
A
567 568anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
672 679first strand
Strand 2
A
662 669anti-parallel
Strand 3
A
640 650anti-parallel
Strand 4
A
718 720anti-parallel
Strand 5
A
699 700anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
672 679first strand
Strand 2
A
662 669anti-parallel
Strand 3
A
640 650anti-parallel
Strand 4
A
725 730anti-parallel
Strand 5
A
743 747anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il