Analysis of interatomic Contacts of Structural Units in PDB entry:
6NIU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6NIU entry

There are 5 chains in PDB entry 6NIU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
H	GLN 1	SER 113
L	GLN 1	LEU 107
B	ILE 1	SER 403
A	ILE 1	SER 403
Z	ILE 1	ARG 283

There are 42 helices in PDB entry 6NIU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	H	83	87	Right-handed 310
Helix 2	AA2	L	79	83	Right-handed 310
Helix 3	AA3	B	82	87	Right-handed 310
Helix 4	AA4	B	148	152	Right-handed 310
Helix 5	AA5	B	181	183	Right-handed 310
Helix 6	AA6	B	192	195	Right-handed 310
Helix 7	AA7	B	197	201	Right-handed 310
Helix 8	AA8	B	214	219	Right-handed alpha
Helix 9	AA9	B	238	241	Right-handed 310
Helix 10	AB1	B	261	269	Right-handed alpha
Helix 11	AB2	B	391	395	Right-handed 310
Helix 12	AB3	A	82	87	Right-handed 310
Helix 13	AB4	A	148	152	Right-handed 310
Helix 14	AB5	A	181	183	Right-handed 310
Helix 15	AB6	A	192	195	Right-handed 310
Helix 16	AB7	A	197	201	Right-handed 310
Helix 17	AB8	A	214	219	Right-handed alpha
Helix 18	AB9	A	238	241	Right-handed 310
Helix 19	AC1	A	261	269	Right-handed alpha
Helix 20	AC2	A	391	395	Right-handed 310
Helix 21	AC3	Z	82	87	Right-handed 310
Helix 22	AC4	Z	148	152	Right-handed 310
Helix 23	AC5	Z	181	183	Right-handed 310
Helix 24	AC6	Z	192	195	Right-handed 310
Helix 25	AC7	Z	197	199	Right-handed 310
Helix 26	AC8	Z	215	219	Right-handed alpha
Helix 27	AC9	Z	238	241	Right-handed 310
Helix 28	AD1	Z	261	269	Right-handed alpha
Helix 29	AD2	E	82	87	Right-handed 310
Helix 30	AD3	E	148	152	Right-handed 310
Helix 31	AD4	E	181	183	Right-handed 310
Helix 32	AD5	E	197	199	Right-handed 310
Helix 33	AD6	E	215	219	Right-handed alpha
Helix 34	AD7	E	238	241	Right-handed 310
Helix 35	AD8	E	261	269	Right-handed alpha
Helix 36	AD9	E	391	395	Right-handed 310
Helix 37	AE1	F	83	87	Right-handed 310
Helix 38	AE2	G	79	83	Right-handed 310
Helix 39	AE3	I	83	87	Right-handed 310
Helix 40	AE4	J	79	83	Right-handed 310
Helix 41	AE5	M	83	87	Right-handed 310
Helix 42	AE6	N	79	83	Right-handed 310

There are 62 sheets in PDB entry 6NIU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9, AG1, AG2, AG3, AG4, AG5, AG6, AG7, AG8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	7	first strand
Strand 2	H	18	25	anti-parallel
Strand 3	H	77	82	anti-parallel
Strand 4	H	67	68	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	7	first strand
Strand 2	H	18	25	anti-parallel
Strand 3	H	77	82	anti-parallel
Strand 4	H	71	72	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	11	12	first strand
Strand 2	H	107	111	parallel
Strand 3	H	88	95	anti-parallel
Strand 4	H	33	39	anti-parallel
Strand 5	H	46	51	anti-parallel
Strand 6	H	57	59	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	11	12	first strand
Strand 2	H	107	111	parallel
Strand 3	H	88	95	anti-parallel
Strand 4	H	102	103	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	9	12	first strand
Strand 2	L	102	105	parallel
Strand 3	L	85	92	anti-parallel
Strand 4	L	33	38	anti-parallel
Strand 5	L	45	49	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	9	12	first strand
Strand 2	L	102	105	parallel
Strand 3	L	85	92	anti-parallel
Strand 4	L	95	98	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	19	24	first strand
Strand 2	L	70	75	anti-parallel
Strand 3	L	62	66	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	165	169	first strand
Strand 2	B	135	143	anti-parallel
Strand 3	B	41	50	anti-parallel
Strand 4	B	30	33	anti-parallel
Strand 5	B	202	205	first strand
Strand 6	B	109	128	anti-parallel
Strand 7	B	94	99	anti-parallel

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There are 9 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	55	72	first strand
Strand 2	B	109	128	anti-parallel
Strand 3	B	202	205	anti-parallel
Strand 4	B	210	213	anti-parallel
Strand 5	B	273	278	anti-parallel
Strand 6	B	281	284	anti-parallel
Strand 7	B	41	50	anti-parallel
Strand 8	B	30	33	anti-parallel
Strand 9	B	9	10	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	90	91	first strand
Strand 2	B	109	128	anti-parallel
Strand 3	B	55	72	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	22	25	first strand
Strand 2	B	289	294	anti-parallel
Strand 3	B	185	191	anti-parallel
Strand 4	B	175	179	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	243	248	first strand
Strand 2	B	252	257	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	312	314	first strand
Strand 2	B	326	332	anti-parallel
Strand 3	B	319	320	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	312	314	first strand
Strand 2	B	326	332	anti-parallel
Strand 3	B	372	379	anti-parallel
Strand 4	B	357	358	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	354	355	first strand
Strand 2	B	343	346	anti-parallel
Strand 3	B	384	389	anti-parallel
Strand 4	B	396	401	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	9	13	first strand
Strand 2	A	30	34	parallel
Strand 3	A	41	50	anti-parallel
Strand 4	A	135	143	anti-parallel
Strand 5	A	165	169	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	9	13	first strand
Strand 2	A	30	34	parallel
Strand 3	A	41	50	anti-parallel
Strand 4	A	281	284	anti-parallel
Strand 5	A	276	278	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	20	24	first strand
Strand 2	A	290	294	anti-parallel
Strand 3	A	185	191	anti-parallel
Strand 4	A	175	179	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	72	first strand
Strand 2	A	109	129	anti-parallel
Strand 3	A	94	99	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	90	91	first strand
Strand 2	A	109	129	anti-parallel
Strand 3	A	202	205	anti-parallel
Strand 4	A	210	213	anti-parallel
Strand 5	A	273	274	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	225	226	first strand
Strand 2	A	236	237	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	243	248	first strand
Strand 2	A	252	257	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	312	314	first strand
Strand 2	A	326	332	anti-parallel
Strand 3	A	319	320	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	312	314	first strand
Strand 2	A	326	332	anti-parallel
Strand 3	A	372	379	anti-parallel
Strand 4	A	357	358	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	354	355	first strand
Strand 2	A	343	346	anti-parallel
Strand 3	A	384	389	anti-parallel
Strand 4	A	396	401	anti-parallel

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There are 9 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Z	94	99	first strand
Strand 2	Z	109	128	anti-parallel
Strand 3	Z	201	205	anti-parallel
Strand 4	Z	210	214	anti-parallel
Strand 5	Z	273	278	anti-parallel
Strand 6	Z	281	284	anti-parallel
Strand 7	Z	41	50	anti-parallel
Strand 8	Z	30	34	anti-parallel
Strand 9	Z	9	13	parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Z	225	227	first strand
Strand 2	Z	57	72	anti-parallel
Strand 3	Z	109	128	anti-parallel
Strand 4	Z	90	91	anti-parallel

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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Z	164	169	first strand
Strand 2	Z	135	143	anti-parallel
Strand 3	Z	41	50	anti-parallel
Strand 4	Z	30	34	anti-parallel
Strand 5	Z	9	13	parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Z	20	26	first strand
Strand 2	Z	288	294	anti-parallel
Strand 3	Z	185	190	anti-parallel
Strand 4	Z	177	179	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Z	243	248	first strand
Strand 2	Z	252	257	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Z	312	314	first strand
Strand 2	Z	326	332	anti-parallel
Strand 3	Z	319	320	anti-parallel

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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Z	312	314	first strand
Strand 2	Z	326	332	anti-parallel
Strand 3	Z	372	378	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Z	343	344	first strand
Strand 2	Z	383	389	anti-parallel
Strand 3	Z	396	402	anti-parallel

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There are 5 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	9	12	first strand
Strand 2	E	30	35	parallel
Strand 3	E	38	50	anti-parallel
Strand 4	E	135	143	anti-parallel
Strand 5	E	165	169	anti-parallel

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There are 5 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	9	12	first strand
Strand 2	E	30	35	parallel
Strand 3	E	38	50	anti-parallel
Strand 4	E	281	284	anti-parallel
Strand 5	E	276	278	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	21	26	first strand
Strand 2	E	288	294	anti-parallel
Strand 3	E	185	191	anti-parallel
Strand 4	E	175	179	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	90	91	first strand
Strand 2	E	110	129	anti-parallel
Strand 3	E	54	72	anti-parallel
Strand 4	E	225	227	anti-parallel

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There are 5 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	94	98	first strand
Strand 2	E	110	129	anti-parallel
Strand 3	E	201	205	anti-parallel
Strand 4	E	210	214	anti-parallel
Strand 5	E	273	274	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	243	248	first strand
Strand 2	E	252	257	anti-parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	312	314	first strand
Strand 2	E	326	332	anti-parallel
Strand 3	E	319	320	anti-parallel

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There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	312	314	first strand
Strand 2	E	326	332	anti-parallel
Strand 3	E	372	378	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	339	340	first strand
Strand 2	E	364	365	anti-parallel

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There are 3 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	343	346	first strand
Strand 2	E	384	389	anti-parallel
Strand 3	E	396	401	anti-parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	4	7	first strand
Strand 2	F	18	24	anti-parallel
Strand 3	F	77	82	anti-parallel
Strand 4	F	67	72	anti-parallel

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There are 6 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	11	12	first strand
Strand 2	F	107	111	parallel
Strand 3	F	88	95	anti-parallel
Strand 4	F	33	39	anti-parallel
Strand 5	F	46	51	anti-parallel
Strand 6	F	57	59	anti-parallel

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There are 4 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	11	12	first strand
Strand 2	F	107	111	parallel
Strand 3	F	88	95	anti-parallel
Strand 4	F	102	103	anti-parallel

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There are 5 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	9	13	first strand
Strand 2	G	102	106	parallel
Strand 3	G	85	92	anti-parallel
Strand 4	G	33	38	anti-parallel
Strand 5	G	45	48	anti-parallel

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There are 4 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	9	13	first strand
Strand 2	G	102	106	parallel
Strand 3	G	85	92	anti-parallel
Strand 4	G	95	98	anti-parallel

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There are 2 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	62	66	first strand
Strand 2	G	71	75	anti-parallel

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There are 4 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	3	7	first strand
Strand 2	I	18	25	anti-parallel
Strand 3	I	77	82	anti-parallel
Strand 4	I	67	72	anti-parallel

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There are 2 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	11	12	first strand
Strand 2	I	110	111	parallel

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There are 5 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	57	59	first strand
Strand 2	I	46	51	anti-parallel
Strand 3	I	33	39	anti-parallel
Strand 4	I	89	95	anti-parallel
Strand 5	I	102	103	anti-parallel

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There are 5 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	57	59	first strand
Strand 2	I	46	51	anti-parallel
Strand 3	I	33	39	anti-parallel
Strand 4	I	89	95	anti-parallel
Strand 5	I	107	108	anti-parallel

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There are 5 strands in AF9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	9	12	first strand
Strand 2	J	102	105	parallel
Strand 3	J	85	92	anti-parallel
Strand 4	J	33	38	anti-parallel
Strand 5	J	45	48	anti-parallel

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There are 4 strands in AG1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	9	12	first strand
Strand 2	J	102	105	parallel
Strand 3	J	85	92	anti-parallel
Strand 4	J	95	98	anti-parallel

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There are 3 strands in AG2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	19	24	first strand
Strand 2	J	70	75	anti-parallel
Strand 3	J	62	66	anti-parallel

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There are 4 strands in AG3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	3	7	first strand
Strand 2	M	18	25	anti-parallel
Strand 3	M	77	82	anti-parallel
Strand 4	M	67	72	anti-parallel

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There are 6 strands in AG4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	11	12	first strand
Strand 2	M	107	111	parallel
Strand 3	M	88	95	anti-parallel
Strand 4	M	33	39	anti-parallel
Strand 5	M	46	52	anti-parallel
Strand 6	M	57	59	anti-parallel

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There are 4 strands in AG5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	11	12	first strand
Strand 2	M	107	111	parallel
Strand 3	M	88	95	anti-parallel
Strand 4	M	102	103	anti-parallel

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There are 5 strands in AG6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	9	13	first strand
Strand 2	N	102	106	parallel
Strand 3	N	85	92	anti-parallel
Strand 4	N	33	38	anti-parallel
Strand 5	N	45	48	anti-parallel

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There are 4 strands in AG7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	9	13	first strand
Strand 2	N	102	106	parallel
Strand 3	N	85	92	anti-parallel
Strand 4	N	95	98	anti-parallel

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There are 3 strands in AG8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	19	24	first strand
Strand 2	N	70	75	anti-parallel
Strand 3	N	62	66	anti-parallel

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Analysis of interatomic Contacts of Structural Units in PDB entry: 6NIU

Analysis of interatomic Contacts of Structural Units in PDB entry:
6NIU