Analysis of interatomic Contacts of Structural Units in PDB entry:
6NJX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6NJX entry

There is 1 chain in PDB entry 6NJX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 390HIS 599
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 6NJX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
401 415Right-handed alpha
Helix 2
AA2
A
418 423Right-handed alpha
Helix 3
AA3
A
434 442Right-handed alpha
Helix 4
AA4
A
465 478Right-handed alpha
Helix 5
AA5
A
487 497Right-handed alpha
Helix 6
AA6
A
506 514Right-handed alpha
Helix 7
AA7
A
516 528Right-handed alpha
Helix 8
AA8
A
532 545Right-handed alpha
Helix 9
AA9
A
550 562Right-handed alpha
Helix 10
AB1
A
562 571Right-handed alpha
Helix 11
AB2
A
572 574Right-handed 310
Helix 12
AB3
A
575 579Right-handed 310
Helix 13
AB4
A
580 599Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6NJX.

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
424 428first strand
Strand 2
A
395 399parallel
Strand 3
A
450 455parallel
Strand 4
A
500 503parallel
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