Analysis of interatomic Contacts of Structural Units in PDB entry:
6NMN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6NMN entry

There are 2 chains in PDB entry 6NMN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PHE 253
B
 MET 1PHE 253
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 6NMN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 28Right-handed alpha
Helix 2
AA2
A
82 90Right-handed alpha
Helix 3
AA3
A
95 100Right-handed alpha
Helix 4
AA4
A
101 105Right-handed 310
Helix 5
AA5
A
114 125Right-handed alpha
Helix 6
AA6
A
127 142Right-handed alpha
Helix 7
AA7
A
142 157Right-handed alpha
Helix 8
AA8
A
158 160Right-handed 310
Helix 9
AA9
A
161 182Right-handed alpha
Helix 10
AB1
A
190 196Right-handed alpha
Helix 11
AB2
A
204 215Right-handed alpha
Helix 12
AB3
A
219 242Right-handed alpha
Helix 13
AB4
B
8 28Right-handed alpha
Helix 14
AB5
B
82 90Right-handed alpha
Helix 15
AB6
B
95 100Right-handed alpha
Helix 16
AB7
B
101 105Right-handed 310
Helix 17
AB8
B
114 125Right-handed alpha
Helix 18
AB9
B
127 142Right-handed alpha
Helix 19
AC1
B
142 157Right-handed alpha
Helix 20
AC2
B
158 160Right-handed 310
Helix 21
AC3
B
161 182Right-handed alpha
Helix 22
AC4
B
187 189Right-handed 310
Helix 23
AC5
B
190 196Right-handed alpha
Helix 24
AC6
B
204 215Right-handed alpha
Helix 25
AC7
B
219 242Right-handed alpha
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There are 2 sheets in PDB entry 6NMN. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 69first strand
Strand 2
A
74 81anti-parallel
Strand 3
A
51 57parallel
Strand 4
A
31 36anti-parallel
Strand 5
A
107 111anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
63 69first strand
Strand 2
B
74 81anti-parallel
Strand 3
B
51 57parallel
Strand 4
B
31 36anti-parallel
Strand 5
B
107 111anti-parallel
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