Analysis of interatomic Contacts of Structural Units in PDB entry:
6NNA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6NNA entry

There are 4 chains in PDB entry 6NNA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 1109PHE 1880
A
 PRO 1882GLU 2113
B
 GLN 1109PHE 1880
B
 PRO 1882GLU 2113
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 53 helices in PDB entry 6NNA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1131 1150Right-handed alpha
Helix 2
AA2
A
1176 1188Right-handed alpha
Helix 3
AA3
A
1200 1206Right-handed alpha
Helix 4
AA4
A
1207 1212Right-handed 310
Helix 5
AA5
A
1217 1220Right-handed 310
Helix 6
AA6
A
1221 1234Right-handed alpha
Helix 7
AA7
A
1246 1251Right-handed alpha
Helix 8
AA8
A
1255 1261Right-handed alpha
Helix 9
AA9
A
1276 1282Right-handed 310
Helix 10
AB1
A
1283 1290Right-handed alpha
Helix 11
AB2
A
1304 1308Right-handed 310
Helix 12
AB3
A
1324 1335Right-handed alpha
Helix 13
AB4
A
1351 1361Right-handed alpha
Helix 14
AB5
A
1373 1384Right-handed alpha
Helix 15
AB6
A
1423 1434Right-handed alpha
Helix 16
AB7
A
1452 1461Right-handed alpha
Helix 17
AB8
A
1465 1467Right-handed 310
Helix 18
AB9
A
1490 1500Right-handed alpha
Helix 19
AC1
A
1894 1907Right-handed alpha
Helix 20
AC2
A
1922 1935Right-handed alpha
Helix 21
AC3
A
1948 1963Right-handed alpha
Helix 22
AC4
A
1979 1983Right-handed 310
Helix 23
AC5
A
1984 2010Right-handed alpha
Helix 24
AC6
A
2022 2026Right-handed alpha
Helix 25
AC7
A
2031 2051Right-handed alpha
Helix 26
AC8
A
2087 2100Right-handed alpha
Helix 27
AC9
B
1131 1149Right-handed alpha
Helix 28
AD1
B
1176 1188Right-handed alpha
Helix 29
AD2
B
1200 1205Right-handed alpha
Helix 30
AD3
B
1208 1212Right-handed 310
Helix 31
AD4
B
1221 1234Right-handed alpha
Helix 32
AD5
B
1246 1251Right-handed alpha
Helix 33
AD6
B
1252 1254Right-handed 310
Helix 34
AD7
B
1255 1261Right-handed alpha
Helix 35
AD8
B
1276 1282Right-handed 310
Helix 36
AD9
B
1283 1290Right-handed alpha
Helix 37
AE1
B
1304 1308Right-handed 310
Helix 38
AE2
B
1324 1335Right-handed alpha
Helix 39
AE3
B
1351 1361Right-handed alpha
Helix 40
AE4
B
1373 1384Right-handed alpha
Helix 41
AE5
B
1423 1434Right-handed alpha
Helix 42
AE6
B
1452 1461Right-handed alpha
Helix 43
AE7
B
1465 1467Right-handed 310
Helix 44
AE8
B
1490 1500Right-handed alpha
Helix 45
AE9
B
1894 1907Right-handed alpha
Helix 46
AF1
B
1922 1935Right-handed alpha
Helix 47
AF2
B
1948 1963Right-handed alpha
Helix 48
AF3
B
1979 1983Right-handed 310
Helix 49
AF4
B
1984 2010Right-handed alpha
Helix 50
AF5
B
2022 2026Right-handed alpha
Helix 51
AF6
B
2031 2051Right-handed alpha
Helix 52
AF7
B
2067 2072Right-handed alpha
Helix 53
AF8
B
2087 2100Right-handed alpha
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There are 6 sheets in PDB entry 6NNA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 13 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1413 1416first strand
Strand 2
A
1441 1445parallel
Strand 3
A
1469 1474parallel
Strand 4
A
1503 1507parallel
Strand 5
A
1510 1518anti-parallel
Strand 6
A
1113 1121anti-parallel
Strand 7
A
2105 2111anti-parallel
Strand 8
A
2056 2060parallel
Strand 9
A
2015 2021parallel
Strand 10
A
1965 1970parallel
Strand 11
A
1886 1890parallel
Strand 12
A
1911 1915parallel
Strand 13
A
1938 1942parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1413 1416first strand
Strand 2
A
1441 1445parallel
Strand 3
A
1469 1474parallel
Strand 4
A
1503 1507parallel
Strand 5
A
1510 1518anti-parallel
Strand 6
A
1113 1121anti-parallel
Strand 7
A
2105 2111anti-parallel
Strand 8
A
2083 2084anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1123 1127first strand
Strand 2
A
1387 1394parallel
Strand 3
A
1398 1404anti-parallel
Strand 4
A
1336 1347anti-parallel
Strand 5
A
1310 1316parallel
Strand 6
A
1239 1244parallel
Strand 7
A
1267 1274parallel
Strand 8
A
1293 1296parallel
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There are 13 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1413 1416first strand
Strand 2
B
1441 1445parallel
Strand 3
B
1469 1474parallel
Strand 4
B
1503 1506parallel
Strand 5
B
1511 1518anti-parallel
Strand 6
B
1113 1121anti-parallel
Strand 7
B
2105 2111anti-parallel
Strand 8
B
2056 2060parallel
Strand 9
B
2015 2021parallel
Strand 10
B
1965 1970parallel
Strand 11
B
1886 1890parallel
Strand 12
B
1911 1915parallel
Strand 13
B
1938 1942parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1413 1416first strand
Strand 2
B
1441 1445parallel
Strand 3
B
1469 1474parallel
Strand 4
B
1503 1506parallel
Strand 5
B
1511 1518anti-parallel
Strand 6
B
1113 1121anti-parallel
Strand 7
B
2105 2111anti-parallel
Strand 8
B
2083 2084anti-parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1123 1127first strand
Strand 2
B
1387 1394parallel
Strand 3
B
1398 1404anti-parallel
Strand 4
B
1336 1347anti-parallel
Strand 5
B
1310 1316parallel
Strand 6
B
1239 1245parallel
Strand 7
B
1267 1274parallel
Strand 8
B
1293 1296parallel
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