Analysis of interatomic Contacts of Structural Units in PDB entry:
6NO4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6NO4 entry

There are 2 chains in PDB entry 6NO4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PHE 233
B
 ILE 3PHE 233
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 6NO4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 15Right-handed alpha
Helix 2
AA2
A
27 40Right-handed alpha
Helix 3
AA3
A
76 88Right-handed alpha
Helix 4
AA4
A
143 151Right-handed alpha
Helix 5
AA5
A
167 178Right-handed alpha
Helix 6
AA6
A
183 202Right-handed alpha
Helix 7
AA7
B
4 15Right-handed alpha
Helix 8
AA8
B
27 40Right-handed alpha
Helix 9
AA9
B
76 88Right-handed alpha
Helix 10
AB1
B
143 151Right-handed alpha
Helix 11
AB2
B
152 155Right-handed 310
Helix 12
AB3
B
167 178Right-handed alpha
Helix 13
AB4
B
182 202Right-handed alpha
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There are 7 sheets in PDB entry 6NO4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 20first strand
Strand 2
A
222 227parallel
Strand 3
A
206 216anti-parallel
Strand 4
A
114 126anti-parallel
Strand 5
A
131 137anti-parallel
Strand 6
A
156 159anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 20first strand
Strand 2
A
222 227parallel
Strand 3
A
206 216anti-parallel
Strand 4
A
230 232anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 25first strand
Strand 2
A
107 111anti-parallel
Strand 3
A
47 51anti-parallel
Strand 4
A
71 74anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 63first strand
Strand 2
A
90 93anti-parallel
Strand 3
A
102 104anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
23 25first strand
Strand 2
B
106 111anti-parallel
Strand 3
B
47 52anti-parallel
Strand 4
B
71 74anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
156 159first strand
Strand 2
B
131 137anti-parallel
Strand 3
B
114 126anti-parallel
Strand 4
B
206 216anti-parallel
Strand 5
B
222 226anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
156 159first strand
Strand 2
B
131 137anti-parallel
Strand 3
B
114 126anti-parallel
Strand 4
B
206 216anti-parallel
Strand 5
B
229 232anti-parallel
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