Analysis of interatomic Contacts of Structural Units in PDB entry:
6NO7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6NO7 entry

Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 10 chains in PDB entry 6NO7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 15	PHE 138
A	GLU 140	TRP 196
A	LEU 198	VAL 337
A	ILE 339	PHE 350
B	ARG 92	SER 376
C	GLU 11	PHE 138
C	GLU 140	TRP 196
C	LEU 198	VAL 337
C	ILE 339	PHE 350
D	GLY 91	GLN 370

There are110 helices in PDB entry 6NO7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	15	32	Right-handed alpha
Helix 2	AA2	A	39	41	Right-handed 310
Helix 3	AA3	A	76	82	Right-handed alpha
Helix 4	AA4	A	84	96	Right-handed alpha
Helix 5	AA5	A	127	136	Right-handed alpha
Helix 6	AA6	A	139	160	Right-handed alpha
Helix 7	AA7	A	168	170	Right-handed 310
Helix 8	AA8	A	201	205	Right-handed 310
Helix 9	AA9	A	206	211	Right-handed alpha
Helix 10	AB1	A	218	234	Right-handed alpha
Helix 11	AB2	A	242	253	Right-handed alpha
Helix 12	AB3	A	262	273	Right-handed alpha
Helix 13	AB4	A	288	293	Right-handed alpha
Helix 14	AB5	A	294	298	Right-handed 310
Helix 15	AB6	A	301	307	Right-handed alpha
Helix 16	AB7	B	104	111	Right-handed alpha
Helix 17	AB8	B	119	130	Right-handed alpha
Helix 18	AB9	B	133	138	Right-handed alpha
Helix 19	AC1	B	140	151	Right-handed alpha
Helix 20	AC2	B	199	204	Right-handed 310
Helix 21	AC3	B	226	250	Right-handed alpha
Helix 22	AC4	B	251	255	Right-handed 310
Helix 23	AC5	B	258	269	Right-handed alpha
Helix 24	AC6	B	324	328	Right-handed 310
Helix 25	AC7	B	350	358	Right-handed alpha
Helix 26	AC8	B	359	365	Right-handed alpha
Helix 27	AC9	B	367	374	Right-handed alpha
Helix 28	AD1	C	15	32	Right-handed alpha
Helix 29	AD2	C	39	41	Right-handed 310
Helix 30	AD3	C	76	82	Right-handed alpha
Helix 31	AD4	C	84	96	Right-handed alpha
Helix 32	AD5	C	127	136	Right-handed alpha
Helix 33	AD6	C	139	160	Right-handed alpha
Helix 34	AD7	C	168	170	Right-handed 310
Helix 35	AD8	C	201	205	Right-handed 310
Helix 36	AD9	C	206	211	Right-handed alpha
Helix 37	AE1	C	217	234	Right-handed alpha
Helix 38	AE2	C	242	253	Right-handed alpha
Helix 39	AE3	C	262	273	Right-handed alpha
Helix 40	AE4	C	288	293	Right-handed alpha
Helix 41	AE5	C	294	298	Right-handed 310
Helix 42	AE6	C	301	307	Right-handed alpha
Helix 43	AE7	D	104	111	Right-handed alpha
Helix 44	AE8	D	119	131	Right-handed alpha
Helix 45	AE9	D	140	151	Right-handed alpha
Helix 46	AF1	D	199	204	Right-handed 310
Helix 47	AF2	D	226	250	Right-handed alpha
Helix 48	AF3	D	251	255	Right-handed 310
Helix 49	AF4	D	258	269	Right-handed alpha
Helix 50	AF5	D	324	328	Right-handed 310
Helix 51	AF6	D	350	358	Right-handed alpha
Helix 52	AF7	D	359	365	Right-handed alpha
Helix 53	AF8	D	367	374	Right-handed alpha
Helix 54	AF9	E	15	32	Right-handed alpha
Helix 55	AG1	E	39	41	Right-handed 310
Helix 56	AG2	E	76	82	Right-handed alpha
Helix 57	AG3	E	84	97	Right-handed alpha
Helix 58	AG4	E	127	136	Right-handed alpha
Helix 59	AG5	E	139	160	Right-handed alpha
Helix 60	AG6	E	168	170	Right-handed 310
Helix 61	AG7	E	201	205	Right-handed 310
Helix 62	AG8	E	206	211	Right-handed alpha
Helix 63	AG9	E	217	234	Right-handed alpha
Helix 64	AH1	E	242	253	Right-handed alpha
Helix 65	AH2	E	262	273	Right-handed alpha
Helix 66	AH3	E	288	293	Right-handed alpha
Helix 67	AH4	E	294	298	Right-handed 310
Helix 68	AH5	E	302	307	Right-handed alpha
Helix 69	AH6	E	343	348	Right-handed alpha
Helix 70	AH7	F	105	109	Right-handed 310
Helix 71	AH8	F	119	131	Right-handed alpha
Helix 72	AH9	F	133	138	Right-handed alpha
Helix 73	AI1	F	140	151	Right-handed alpha
Helix 74	AI2	F	199	204	Right-handed 310
Helix 75	AI3	F	226	250	Right-handed alpha
Helix 76	AI4	F	251	255	Right-handed 310
Helix 77	AI5	F	258	269	Right-handed alpha
Helix 78	AI6	F	324	328	Right-handed 310
Helix 79	AI7	F	350	358	Right-handed alpha
Helix 80	AI8	F	359	365	Right-handed alpha
Helix 81	AI9	F	367	374	Right-handed alpha
Helix 82	AJ1	G	15	32	Right-handed alpha
Helix 83	AJ2	G	39	41	Right-handed 310
Helix 84	AJ3	G	76	82	Right-handed alpha
Helix 85	AJ4	G	84	97	Right-handed alpha
Helix 86	AJ5	G	127	136	Right-handed alpha
Helix 87	AJ6	G	139	160	Right-handed alpha
Helix 88	AJ7	G	168	170	Right-handed 310
Helix 89	AJ8	G	184	188	Right-handed 310
Helix 90	AJ9	G	201	205	Right-handed 310
Helix 91	AK1	G	206	211	Right-handed alpha
Helix 92	AK2	G	218	234	Right-handed alpha
Helix 93	AK3	G	242	253	Right-handed alpha
Helix 94	AK4	G	262	273	Right-handed alpha
Helix 95	AK5	G	288	293	Right-handed alpha
Helix 96	AK6	G	294	298	Right-handed 310
Helix 97	AK7	G	302	307	Right-handed alpha
Helix 98	AK8	G	343	348	Right-handed alpha
Helix 99	AK9	H	105	109	Right-handed 310
Helix 100	AL1	H	119	131	Right-handed alpha
Helix 101	AL2	H	133	138	Right-handed alpha
Helix 102	AL3	H	140	151	Right-handed alpha
Helix 103	AL4	H	199	204	Right-handed 310
Helix 104	AL5	H	226	250	Right-handed alpha
Helix 105	AL6	H	251	255	Right-handed 310
Helix 106	AL7	H	258	269	Right-handed alpha
Helix 107	AL8	H	323	329	Right-handed alpha
Helix 108	AL9	H	350	358	Right-handed alpha
Helix 109	AM1	H	359	365	Right-handed alpha
Helix 110	AM2	H	367	374	Right-handed alpha

There are 37 sheets in PDB entry 6NO7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	43	51	first strand
Strand 2	A	56	62	anti-parallel
Strand 3	A	68	75	anti-parallel
Strand 4	A	115	121	anti-parallel
Strand 5	A	106	111	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	162	163	first strand
Strand 2	A	189	190	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	172	174	first strand
Strand 2	A	180	182	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	199	200	first strand
Strand 2	B	98	99	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	113	115	first strand
Strand 2	F	112	114	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	152	156	first strand
Strand 2	B	219	225	anti-parallel
Strand 3	B	171	177	anti-parallel
Strand 4	B	197	198	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	161	163	first strand
Strand 2	B	212	215	anti-parallel
Strand 3	B	180	184	anti-parallel
Strand 4	B	187	192	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	270	274	first strand
Strand 2	B	336	349	anti-parallel
Strand 3	B	289	303	anti-parallel
Strand 4	B	310	316	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	279	281	first strand
Strand 2	B	336	349	anti-parallel
Strand 3	B	289	303	anti-parallel
Strand 4	B	321	322	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	286	287	first strand
Strand 2	B	331	332	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	43	51	first strand
Strand 2	C	56	62	anti-parallel
Strand 3	C	68	75	anti-parallel
Strand 4	C	115	121	anti-parallel
Strand 5	C	106	111	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	162	163	first strand
Strand 2	C	189	190	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	172	174	first strand
Strand 2	C	180	182	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	199	200	first strand
Strand 2	D	98	99	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	152	156	first strand
Strand 2	D	219	225	anti-parallel
Strand 3	D	171	177	anti-parallel
Strand 4	D	197	198	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	161	163	first strand
Strand 2	D	212	215	anti-parallel
Strand 3	D	180	184	anti-parallel
Strand 4	D	187	192	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	270	274	first strand
Strand 2	D	336	349	anti-parallel
Strand 3	D	289	303	anti-parallel
Strand 4	D	310	316	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	279	281	first strand
Strand 2	D	336	349	anti-parallel
Strand 3	D	289	303	anti-parallel
Strand 4	D	321	322	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	286	287	first strand
Strand 2	D	331	332	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	43	51	first strand
Strand 2	E	56	62	anti-parallel
Strand 3	E	68	75	anti-parallel
Strand 4	E	115	120	anti-parallel
Strand 5	E	106	111	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	162	163	first strand
Strand 2	E	189	190	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	172	174	first strand
Strand 2	E	180	182	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	199	200	first strand
Strand 2	F	98	99	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	152	156	first strand
Strand 2	F	219	225	anti-parallel
Strand 3	F	171	177	anti-parallel
Strand 4	F	197	198	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	161	163	first strand
Strand 2	F	212	215	anti-parallel
Strand 3	F	180	184	anti-parallel
Strand 4	F	187	192	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	270	274	first strand
Strand 2	F	336	349	anti-parallel
Strand 3	F	289	302	anti-parallel
Strand 4	F	311	316	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	279	281	first strand
Strand 2	F	336	349	anti-parallel
Strand 3	F	289	302	anti-parallel
Strand 4	F	321	322	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	286	287	first strand
Strand 2	F	331	332	anti-parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	43	51	first strand
Strand 2	G	56	62	anti-parallel
Strand 3	G	68	75	anti-parallel
Strand 4	G	115	120	anti-parallel
Strand 5	G	106	111	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	162	163	first strand
Strand 2	G	189	190	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	172	174	first strand
Strand 2	G	180	182	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	199	200	first strand
Strand 2	H	98	99	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	152	156	first strand
Strand 2	H	219	225	anti-parallel
Strand 3	H	171	177	anti-parallel
Strand 4	H	197	198	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	161	163	first strand
Strand 2	H	211	215	anti-parallel
Strand 3	H	180	184	anti-parallel
Strand 4	H	187	192	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	270	274	first strand
Strand 2	H	336	349	anti-parallel
Strand 3	H	289	302	anti-parallel
Strand 4	H	311	316	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	279	281	first strand
Strand 2	H	336	349	anti-parallel
Strand 3	H	289	302	anti-parallel
Strand 4	H	321	322	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	286	287	first strand
Strand 2	H	331	332	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6NO7

Analysis of interatomic Contacts of Structural Units in PDB entry:
6NO7